GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:Q90813

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) No Information Provided.
Protein Name(s) Ch-runtB2 (ECO:0000313 with EMBL:CAA85297.1)
External Links
UniProt Q90813
EMBL Z36530
PIR S47469
RefSeq NP_990558.1
UniGene Gga.45609
ProteinModelPortal Q90813
SMR Q90813
STRING 9031.ENSGALP00000029722
GeneID 396152
KEGG gga:396152
CTD 861
eggNOG NOG123889
HOGENOM HOG000045616
HOVERGEN HBG060268
InParanoid Q90813
KO K08367
OrthoDB EOG7WQ7TV
PhylomeDB Q90813
TreeFam TF321496
NextBio 20816208
PRO PR:Q90813
GO GO:0005634
GO:0005524
GO:0003677
GO:0003700
Gene3D 2.60.40.720
4.10.770.10
InterPro IPR000040
IPR008967
IPR012346
IPR013524
IPR027384
IPR013711
IPR016554
PANTHER PTHR11950
Pfam PF00853
PF08504
PIRSF PIRSF009374
PRINTS PR00967
SUPFAM SSF49417
PROSITE PS51062

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0030182

neuron differentiation

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:99852
PANTHER:PTN000237028

P

Seeded From UniProt

complete

involved_in

GO:0030097

hemopoiesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000237028
UniProtKB:Q01196
ZFIN:ZDB-GENE-000605-1

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:102672
MGI:MGI:99829
MGI:MGI:99852
PANTHER:PTN000237028
RGD:2282
RGD:2283
UniProtKB:Q01196
UniProtKB:Q13761
UniProtKB:Q13950
UniProtKB:Q8UVG3

C

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:102672
PANTHER:PTN000237028

F

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0000981

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000040
InterPro:IPR012346
InterPro:IPR013524

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR008967
InterPro:IPR012346
InterPro:IPR013524

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000040

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000040
InterPro:IPR012346

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000040
InterPro:IPR008967
InterPro:IPR012346
InterPro:IPR013524

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000461770

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000461770

F

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000461770

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page