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CHICK:Q6T7C0

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SDF1 (ECO:0000313 with EMBL:AAR88102.1)
Protein Name(s) Stromal cell derived factor 1 (ECO:0000313 with EMBL:AAR88102.1)

Stromal cell-derived factor-1 alpha (ECO:0000313 with EMBL:AAR91695.1)

External Links
UniProt Q6T7C0
EMBL AY451855
AY429472
RefSeq NP_989841.1
UniGene Gga.9513
ProteinModelPortal Q6T7C0
SMR Q6T7C0
GeneID 395180
KEGG gga:395180
CTD 6387
HOGENOM HOG000220915
HOVERGEN HBG107437
KO K10031
Reactome REACT_197054
REACT_253620
REACT_255087
NextBio 20815270
PRO PR:Q6T7C0
ExpressionAtlas Q6T7C0
GO GO:0009897
GO:0070062
GO:0001667
GO:0007420
GO:0060326
GO:0070098
GO:0007281
GO:0008354
GO:0006955
GO:0050930
GO:0008045
GO:1902230
GO:2000107
GO:0001569
GO:0045785
GO:0090026
GO:2000406
GO:0042098
InterPro IPR001811
Pfam PF00048
SMART SM00199
SUPFAM SSF54117

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0008009

chemokine activity

PMID:20503359[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

  • results_in_development_of:(UBERON:0014783)
  • happens_during:(GO:0048568)
  • has_start_location:(UBERON:0002103)
  • has_end_location:(UBERON:0014783)
  • regulates_o_results_in_movement_of:(CL:0000680)

Seeded From UniProt

complete

involved_in

GO:0007154

cell communication

PMID:20503359[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • results_in_development_of:(UBERON:0014783)
  • happens_during:(GO:0048568)
  • has_start_location:(UBERON:0002103)
  • has_end_location:(UBERON:0014783)
  • regulates_o_results_in_movement_of:(CL:0000680)

Seeded From UniProt

complete

involved_in

GO:0030335

positive regulation of cell migration

PMID:20503359[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • results_in_development_of:(UBERON:0014783)
  • happens_during:(GO:0048568)
  • has_start_location:(UBERON:0002103)
  • has_end_location:(UBERON:0014783)
  • regulates_o_results_in_movement_of:(CL:0000680)

Seeded From UniProt

complete

involved_in

GO:0014812

muscle cell migration

PMID:20503359[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • results_in_development_of:(UBERON:0014783)
  • happens_during:(GO:0048568)
  • has_start_location:(UBERON:0002103)
  • has_end_location:(UBERON:0014783)
  • regulates_o_results_in_movement_of:(CL:0000680)

Seeded From UniProt

complete

involved_in

GO:1901863

positive regulation of muscle tissue development

PMID:20503359[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • results_in_development_of:(UBERON:0014783)
  • happens_during:(GO:0048568)

Seeded From UniProt

complete

involved_in

GO:0060326

cell chemotaxis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0008009

P

Seeded From UniProt

complete

involved_in

GO:0060326

cell chemotaxis

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0008009

P

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001811
InterPro:IPR036048

C

Seeded From UniProt

complete

involved_in

GO:0006935

chemotaxis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033899

P

Seeded From UniProt

complete

involved_in

GO:0006952

defense response

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033899

P

Seeded From UniProt

complete

involved_in

GO:0006955

immune response

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001811
InterPro:IPR036048

P

Seeded From UniProt

complete

enables

GO:0008009

chemokine activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001811
InterPro:IPR033899
InterPro:IPR036048
InterPro:IPR039813

F

Seeded From UniProt

complete

involved_in

GO:0070098

chemokine-mediated signaling pathway

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039813

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Rehimi, R et al. (2010) A novel role of CXCR4 and SDF-1 during migration of cloacal muscle precursors. Dev. Dyn. 239 1622-31 PubMed GONUTS page