CHICK:PSPC1

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	PSPC1
Protein Name(s)	Paraspeckle component 1
External Links
UniProt	Q5ZK88
EMBL	AJ720196
RefSeq	NP_001026002.1
UniGene	Gga.4178
ProteinModelPortal	Q5ZK88
SMR	Q5ZK88
STRING	9031.ENSGALP00000035658
PaxDb	Q5ZK88
PRIDE	Q5ZK88
Ensembl	ENSGALT00000036438
GeneID	418955
KEGG	gga:418955
CTD	55269
eggNOG	NOG298586
GeneTree	ENSGT00390000005004
HOGENOM	HOG000231095
HOVERGEN	HBG009801
InParanoid	Q5ZK88
OMA	MDNREQE
PhylomeDB	Q5ZK88
NextBio	20822076
PRO	PR:Q5ZK88
Proteomes	UP000000539
GO	GO:0005737 GO:0016363 GO:0016607 GO:0005730 GO:0042382 GO:0000166 GO:0044822 GO:0042752 GO:0006355 GO:0048511 GO:0006351
Gene3D	3.30.70.330
InterPro	IPR012975 IPR012677 IPR000504
Pfam	PF08075 PF00076
SMART	SM00360
PROSITE	PS50102

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
involved_in	GO:0042752	regulation of circadian rhythm	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q8R326	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0004227 FB:FBgn0016977 FB:FBgn0027548 MGI:MGI:1855692 MGI:MGI:1891706 MGI:MGI:2443205 MGI:MGI:2443623 PANTHER:PTN000573351 PomBase:SPAC222.09 UniProtKB:P23246 UniProtKB:Q15233 UniProtKB:Q8IJI0 WB:WBGene00017929	C		Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1918764 PANTHER:PTN000573360	F		Seeded From UniProt	complete
enables	GO:0070888	E-box binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8R326 ensembl:ENSMUSP00000022507	F		Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8R326 ensembl:ENSMUSP00000022507	P		Seeded From UniProt	complete
involved_in	GO:0042752	regulation of circadian rhythm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8R326 ensembl:ENSMUSP00000022507	P		Seeded From UniProt	complete
part_of	GO:0042382	paraspeckles	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8R326 ensembl:ENSMUSP00000022507	C		Seeded From UniProt	complete
part_of	GO:0005654	nucleoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8R326 ensembl:ENSMUSP00000022507	C		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8R326 ensembl:ENSMUSP00000022507	F		Seeded From UniProt	complete
part_of	GO:0005654	nucleoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8WXF1 ensembl:ENSP00000343966	C		Seeded From UniProt	complete
involved_in	GO:0002218	activation of innate immune response	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8WXF1 ensembl:ENSP00000343966	P		Seeded From UniProt	complete
part_of	GO:0001650	fibrillar center	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8WXF1 ensembl:ENSP00000343966	C		Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000504 InterPro:IPR035979	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539	C		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0694	F		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C		Seeded From UniProt	complete
involved_in	GO:0048511	rhythmic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0090	P		Seeded From UniProt	complete
part_of	GO:0016607	nuclear speck	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0186	C		Seeded From UniProt	complete
part_of	GO:0016363	nuclear matrix	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0181	C		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0188	C		Seeded From UniProt	complete
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References

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