CHICK:OTU1

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	YOD1
Protein Name(s)	Ubiquitin thioesterase OTU1
External Links
UniProt	Q5F3A6
EMBL	AJ851744
RefSeq	NP_001026670.1
UniGene	Gga.42722
ProteinModelPortal	Q5F3A6
STRING	9031.ENSGALP00000039556
MEROPS	C85.007
PaxDb	Q5F3A6
GeneID	428266
KEGG	gga:428266
CTD	55432
eggNOG	COG5539
HOGENOM	HOG000193461
HOVERGEN	HBG097006
InParanoid	Q5F3A6
KO	K13719
PhylomeDB	Q5F3A6
NextBio	20829307
PRO	PR:Q5F3A6
Proteomes	UP000000539
GO	GO:0046872 GO:0004843 GO:0030968 GO:0030433 GO:0035871 GO:1990167 GO:0035523 GO:1990168 GO:0071108 GO:0070536
InterPro	IPR003323 IPR029071 IPR007087 IPR015880
Pfam	PF02338
SMART	SM00355
SUPFAM	SSF54236
PROSITE	PS50802 PS00028

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
part_of	GO:0005737	cytoplasm	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	C	Seeded From UniProt	complete
involved_in	GO:0016236	macroautophagy	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:1990168	protein K33-linked deubiquitination	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:1990167	protein K27-linked deubiquitination	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0071108	protein K48-linked deubiquitination	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0070536	protein K63-linked deubiquitination	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0035871	protein K11-linked deubiquitination	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0035523	protein K29-linked deubiquitination	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0030968	endoplasmic reticulum unfolded protein response	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0030433	ubiquitin-dependent ERAD pathway	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
enables	GO:0004843	thiol-dependent ubiquitin-specific protease activity	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q5VVQ6	F	Seeded From UniProt	complete
involved_in	GO:0030968	endoplasmic reticulum unfolded protein response	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000329911 UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0030433	ubiquitin-dependent ERAD pathway	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000329911 UniProtKB:Q5VVQ6	P	Seeded From UniProt	complete
involved_in	GO:0016579	protein deubiquitination	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000329911 SGD:S000001850	P	Seeded From UniProt	complete
part_of	GO:0005829	cytosol	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000329911 TAIR:locus:2007991	C	Seeded From UniProt	complete
enables	GO:0004843	thiol-dependent ubiquitin-specific protease activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000329911 SGD:S000001850 UniProtKB:Q5VVQ6	F	Seeded From UniProt	complete
involved_in	GO:1904153	negative regulation of retrograde protein transport, ER to cytosol	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:1904265	P	Seeded From UniProt	complete
involved_in	GO:1904153	negative regulation of retrograde protein transport, ER to cytosol	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:1904265	P	Seeded From UniProt	complete
enables	GO:1990380	Lys48-specific deubiquitinase activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	F	Seeded From UniProt	complete
involved_in	GO:1990168	protein K33-linked deubiquitination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
involved_in	GO:1990167	protein K27-linked deubiquitination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
enables	GO:1904265	ubiquitin-specific protease activity involved in negative regulation of retrograde protein transport, ER to cytosol	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	F	Seeded From UniProt	complete
involved_in	GO:0071108	protein K48-linked deubiquitination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
involved_in	GO:0070536	protein K63-linked deubiquitination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
involved_in	GO:0035871	protein K11-linked deubiquitination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
involved_in	GO:0035523	protein K29-linked deubiquitination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
enables	GO:0031625	ubiquitin protein ligase binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	F	Seeded From UniProt	complete
involved_in	GO:0030968	endoplasmic reticulum unfolded protein response	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
involved_in	GO:0030433	ubiquitin-dependent ERAD pathway	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
involved_in	GO:0016236	macroautophagy	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	P	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	C	Seeded From UniProt	complete
enables	GO:0004843	thiol-dependent ubiquitin-specific protease activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5VVQ6 ensembl:ENSP00000326813	F	Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR013087	F	Seeded From UniProt	complete
enables	GO:0004843	thiol-dependent ubiquitin-specific protease activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039138	F	Seeded From UniProt	complete
involved_in	GO:0016579	protein deubiquitination	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039138	P	Seeded From UniProt	complete
involved_in	GO:0030433	ubiquitin-dependent ERAD pathway	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039138	P	Seeded From UniProt	complete
enables	GO:1904265	ubiquitin-specific protease activity involved in negative regulation of retrograde protein transport, ER to cytosol	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039138	F	Seeded From UniProt	complete
enables	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:3.4.19.12	F	Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C	Seeded From UniProt	complete
enables	GO:0008234	cysteine-type peptidase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0788	F	Seeded From UniProt	complete
involved_in	GO:0006986	response to unfolded protein	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0834	P	Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F	Seeded From UniProt	complete
enables	GO:0008233	peptidase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0645	F	Seeded From UniProt	complete
involved_in	GO:0006508	proteolysis	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0645	P	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:OTU1

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