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CHICK:O93288
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | TBX4 (ECO:0000313 with EMBL:AAC41298.1) | |
Protein Name(s) | T-Box protein 4 (ECO:0000313 with EMBL:AAC41298.1) | |
External Links | ||
UniProt | O93288 | |
EMBL | AF033670 | |
RefSeq | NP_001025708.1 | |
UniGene | Gga.489 | |
ProteinModelPortal | O93288 | |
SMR | O93288 | |
IntAct | O93288 | |
STRING | 9031.ENSGALP00000008461 | |
PaxDb | O93288 | |
GeneID | 373989 | |
KEGG | gga:373989 | |
CTD | 9496 | |
eggNOG | NOG320009 | |
HOVERGEN | HBG007310 | |
KO | K10178 | |
PhylomeDB | O93288 | |
NextBio | 20813518 | |
GO | GO:0005634 GO:0003677 GO:0003700 GO:0035108 GO:0048705 GO:0006351 | |
Gene3D | 2.60.40.820 | |
InterPro | IPR008967 IPR001699 IPR018186 | |
PANTHER | PTHR11267 | |
Pfam | PF00907 | |
PRINTS | PR00937 | |
SMART | SM00425 | |
SUPFAM | SSF49417 | |
PROSITE | PS01283 PS01264 PS50252 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060174 |
limb bud formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005884 |
actin filament |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035116 |
embryonic hindlimb morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0001725 |
stress fiber |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0030274 |
LIM domain binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0030274 |
LIM domain binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048705 |
skeletal system morphogenesis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035108 |
limb morphogenesis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048705 |
skeletal system morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P57082 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035108 |
limb morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P57082 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035108 |
limb morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70325 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030326 |
embryonic limb morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70325 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030324 |
lung development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70325 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002009 |
morphogenesis of an epithelium |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70325 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70325 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001699 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001699 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000400702 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000400702 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035136 |
forelimb morphogenesis |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Takeuchi, JK et al. (2003) Tbx5 and Tbx4 trigger limb initiation through activation of the Wnt/Fgf signaling cascade. Development 130 2729-39 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Krause, A et al. (2004) Tbx5 and Tbx4 transcription factors interact with a new chicken PDZ-LIM protein in limb and heart development. Dev. Biol. 273 106-20 PubMed GONUTS page
- ↑ 3.0 3.1 Yi, CH et al. (2000) Virtual cloning and physical mapping of a human T-box gene, TBX4. Genomics 67 92-5 PubMed GONUTS page