GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:NCKX1

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SLC24A1 (synonyms: NCKX1)
Protein Name(s) Sodium/potassium/calcium exchanger 1

Na(+)/K(+)/Ca(2+)-exchange protein 1 Retinal rod Na-Ca+K exchanger Solute carrier family 24 member 1

External Links
UniProt Q9IAL8
EMBL AF177984
RefSeq NP_001001773.1
UniGene Gga.300
STRING 9031.ENSGALP00000012102
PaxDb Q9IAL8
GeneID 414892
KEGG gga:414892
CTD 9187
eggNOG COG0530
HOGENOM HOG000231933
HOVERGEN HBG054881
InParanoid Q9IAL8
KO K13749
PhylomeDB Q9IAL8
NextBio 20818766
PRO PR:Q9IAL8
Proteomes UP000000539
GO GO:0016021
GO:0015297
GO:0015293
GO:0006816
GO:0006813
GO:0050896
GO:0006814
GO:0007601
InterPro IPR004481
IPR004837
IPR004817
PANTHER PTHR10846
PTHR10846:SF6
Pfam PF01699
TIGRFAMs TIGR00367

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0060292

long-term synaptic depression

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1923626
PANTHER:PTN000851795

P

Seeded From UniProt

complete

involved_in

GO:0060291

long-term synaptic potentiation

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1923626
PANTHER:PTN000851795

P

Seeded From UniProt

complete

enables

GO:0008273

calcium, potassium:sodium antiporter activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028704
MGI:MGI:2137513
PANTHER:PTN000090975
RGD:1305926
RGD:620080
RGD:628650
RGD:69256
UniProtKB:Q71RS6
UniProtKB:Q9UI40

F

Seeded From UniProt

complete

involved_in

GO:0006874

cellular calcium ion homeostasis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1923626
PANTHER:PTN000090975
RGD:1305926
RGD:69256

P

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG12802
PANTHER:PTN000090975

C

Seeded From UniProt

complete

enables

GO:0005262

calcium channel activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1923626
PANTHER:PTN000090975

F

Seeded From UniProt

complete

involved_in

GO:0070588

calcium ion transmembrane transport

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028704
FB:FBgn0265767
PANTHER:PTN000090975
RGD:1305926
RGD:620080
RGD:628650
RGD:69256

P

Seeded From UniProt

complete

involved_in

GO:0035725

sodium ion transmembrane transport

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0008273

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004837

C

Seeded From UniProt

complete

involved_in

GO:0055085

transmembrane transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004837

P

Seeded From UniProt

complete

involved_in

GO:0006813

potassium ion transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0633

P

Seeded From UniProt

complete

involved_in

GO:0006811

ion transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0406

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

enables

GO:0015297

antiporter activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0050

F

Seeded From UniProt

complete

involved_in

GO:0006816

calcium ion transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0109

P

Seeded From UniProt

complete

involved_in

GO:0050896

response to stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0716

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

involved_in

GO:0006814

sodium ion transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0739

P

Seeded From UniProt

complete

enables

GO:0015293

symporter activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0769

F

Seeded From UniProt

complete

involved_in

GO:0007601

visual perception

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0844

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page