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CHICK:KHDR1
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | KHDRBS1 (ECO:0000250 with UniProtKB:Q07666) (synonyms: SAM68 (ECO:0000312 with EMBL:AAL30071.1)) | |
Protein Name(s) | KH domain-containing, RNA-binding, signal transduction-associated protein 1
Src-associated in mitosis 68 kDa protein Sam68 | |
External Links | ||
UniProt | Q8UUW7 | |
EMBL | AY057837 | |
RefSeq | NP_989561.1 | |
UniGene | Gga.3874 | |
ProteinModelPortal | Q8UUW7 | |
SMR | Q8UUW7 | |
STRING | 9031.ENSGALP00000005166 | |
PaxDb | Q8UUW7 | |
PRIDE | Q8UUW7 | |
GeneID | 374071 | |
KEGG | gga:374071 | |
CTD | 10657 | |
eggNOG | COG5176 | |
HOGENOM | HOG000230771 | |
HOVERGEN | HBG079164 | |
InParanoid | Q8UUW7 | |
KO | K13198 | |
PhylomeDB | Q8UUW7 | |
NextBio | 20813592 | |
PRO | PR:Q8UUW7 | |
Proteomes | UP000000539 | |
GO | GO:0016020 GO:0005634 GO:0003723 GO:0005070 GO:0007166 GO:0000086 GO:0045892 GO:0046833 GO:0009967 GO:0045948 GO:0046831 GO:0006351 | |
Gene3D | 3.30.1370.10 | |
InterPro | IPR004087 IPR004088 | |
Pfam | PF00013 | |
SMART | SM00322 | |
SUPFAM | SSF54791 | |
PROSITE | PS50084 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046833 |
positive regulation of RNA export from nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046831 |
regulation of RNA export from nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045948 |
positive regulation of translational initiation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007166 |
cell surface receptor signaling pathway |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005070 |
SH3/SH2 adaptor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000086 |
G2/M transition of mitotic cell cycle |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009967 |
positive regulation of signal transduction |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0005070 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007049 |
cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Li, QH et al. (2002) Retardation of the G2-M phase progression on gene disruption of RNA binding protein Sam68 in the DT40 cell line. FEBS Lett. 525 145-50 PubMed GONUTS page
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