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CHICK:IRF1
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | IRF1 | |
| Protein Name(s) | Interferon regulatory factor 1
IRF-1 | |
| External Links | ||
| UniProt | Q90876 | |
| EMBL | L39766 AJ621385 | |
| RefSeq | NP_990746.1 | |
| UniGene | Gga.791 | |
| ProteinModelPortal | Q90876 | |
| SMR | Q90876 | |
| PRIDE | Q90876 | |
| Ensembl | ENSGALT00000002244 | |
| GeneID | 396384 | |
| KEGG | gga:396384 | |
| CTD | 3659 | |
| eggNOG | NOG42582 | |
| GeneTree | ENSGT00760000119093 | |
| HOGENOM | HOG000037937 | |
| HOVERGEN | HBG003455 | |
| InParanoid | Q90876 | |
| KO | K09444 | |
| OMA | CKEEPEV | |
| PhylomeDB | Q90876 | |
| Reactome | REACT_197235 REACT_197541 | |
| NextBio | 20816426 | |
| PRO | PR:Q90876 | |
| Proteomes | UP000000539 | |
| ExpressionAtlas | Q90876 | |
| GO | GO:0005737 GO:0000790 GO:0000978 GO:0003700 GO:0006915 GO:0043374 GO:0007050 GO:0035458 GO:0071260 GO:0051607 GO:0060333 GO:0045590 GO:0045892 GO:0032728 GO:0045084 GO:0045944 GO:2000564 GO:0034124 GO:0006351 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR017431 IPR019817 IPR001346 IPR011991 | |
| Pfam | PF00605 | |
| PIRSF | PIRSF038196 | |
| PRINTS | PR00267 | |
| SMART | SM00348 | |
| PROSITE | PS00601 PS51507 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0002376 |
immune system process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1859212 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0000981 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006915 |
apoptotic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008285 |
negative regulation of cell population proliferation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0050776 |
regulation of immune response |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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