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CHICK:HXB4

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) HOXB4 (synonyms: CHOX-Z)
Protein Name(s) Homeobox protein Hox-B4

Homeobox protein Hox-Z Chox-Z

External Links
UniProt P14840
EMBL X17612
PIR S10092
RefSeq NP_990624.1
UniGene Gga.39784
ProteinModelPortal P14840
SMR P14840
STRING 9031.ENSGALP00000000372
GeneID 396230
KEGG gga:396230
CTD 3214
eggNOG NOG297644
HOGENOM HOG000231179
HOVERGEN HBG016849
InParanoid P14840
KO K09304
PhylomeDB P14840
NextBio 20816282
PRO PR:P14840
Proteomes UP000000539
GO GO:0005634
GO:0043565
GO:0003700
GO:0007275
GO:0006351
Gene3D 1.10.10.60
InterPro IPR017995
IPR001827
IPR017970
IPR001356
IPR020479
IPR009057
Pfam PF00046
PRINTS PR00025
PR00024
SMART SM00389
SUPFAM SSF46689
PROSITE PS00032
PS00027
PS50071

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0048704

embryonic skeletal system morphogenesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96176
MGI:MGI:96185
MGI:MGI:96208
PANTHER:PTN002388212

P

Seeded From UniProt

complete

enables

GO:0033613

activating transcription factor binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000439
PANTHER:PTN002518650

F

Seeded From UniProt

complete

involved_in

GO:0009952

anterior/posterior pattern specification

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96176
MGI:MGI:96185
MGI:MGI:96195
MGI:MGI:96208
PANTHER:PTN002518650
WB:WBGene00003024
WB:WBGene00003102

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000439
PANTHER:PTN002518650
UniProtKB:P09016
UniProtKB:P09017
UniProtKB:P17483
WB:WBGene00003024
WB:WBGene00003102

C

Seeded From UniProt

complete

involved_in

GO:0001501

skeletal system development

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96195
PANTHER:PTN002388212

P

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002518650
UniProtKB:P09016

F

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000439
FB:FBgn0003339
PANTHER:PTN002518650
UniProtKB:P09016
WB:WBGene00003102

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0001228

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001356
InterPro:IPR001827
InterPro:IPR009057
InterPro:IPR017995
InterPro:IPR020479

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001827
InterPro:IPR017995

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017995

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001827
InterPro:IPR017970
InterPro:IPR017995

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017970

F

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037
GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238
UniProtKB-KW:KW-0371

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page