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CHICK:HXA6

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) HOXA6
Protein Name(s) Homeobox protein Hox-A6
External Links
UniProt Q5YLH5
EMBL AY307380
RefSeq NP_001026158.1
XP_003640748.2
XP_003640784.1
UniGene Gga.22376
ProteinModelPortal Q5YLH5
SMR Q5YLH5
PaxDb Q5YLH5
Ensembl ENSGALT00000018011
ENSGALT00000043274
ENSGALT00000044589
GeneID 100857163
100858434
420630
KEGG gga:100857163
gga:100858434
gga:420630
CTD 100857163
3203
eggNOG NOG238660
GeneTree ENSGT00760000118945
HOVERGEN HBG016849
InParanoid Q5YLH5
KO K09306
OMA PEQQYKS
PhylomeDB Q5YLH5
NextBio 20823516
PRO PR:Q5YLH5
Proteomes UP000000539
GO GO:0005634
GO:0043565
GO:0003700
GO:0007275
GO:0006351
Gene3D 1.10.10.60
InterPro IPR017995
IPR001827
IPR017970
IPR001356
IPR020479
IPR009057
Pfam PF00046
PRINTS PR00025
PR00024
SMART SM00389
SUPFAM SSF46689
PROSITE PS00032
PS00027
PS50071

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0009952

anterior/posterior pattern specification

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000014
MGI:MGI:96177
MGI:MGI:96178
MGI:MGI:96179
MGI:MGI:96186
MGI:MGI:96187
MGI:MGI:96188
MGI:MGI:96196
MGI:MGI:96197
PANTHER:PTN002388214
WB:WBGene00001174

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000014
FB:FBgn0003944
FB:FBgn0260642
MGI:MGI:96177
MGI:MGI:96179
MGI:MGI:96186
PANTHER:PTN002388214
UniProtKB:P09067
UniProtKB:P20719
WB:WBGene00001174

C

Seeded From UniProt

complete

enables

GO:0000980

RNA polymerase II distal enhancer sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0001077
FB:FBgn0003944
MGI:MGI:96186
PANTHER:PTN002388214

F

Seeded From UniProt

complete

involved_in

GO:0048706

embryonic skeletal system development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P09092
ensembl:ENSMUSP00000058755

P

Seeded From UniProt

complete

involved_in

GO:0048704

embryonic skeletal system morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P09092
ensembl:ENSMUSP00000058755

P

Seeded From UniProt

complete

involved_in

GO:0009952

anterior/posterior pattern specification

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P09092
ensembl:ENSMUSP00000058755

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001356
InterPro:IPR001827
InterPro:IPR009057
InterPro:IPR017995
InterPro:IPR020479

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001827
InterPro:IPR017995

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017995

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001827
InterPro:IPR017970
InterPro:IPR017995

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017970

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037
GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238
UniProtKB-KW:KW-0371

F

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page