GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:HXA2

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) HOXA2 (synonyms: HOXA-2)
Protein Name(s) Homeobox protein Hox-A2
External Links
UniProt Q08727
EMBL X74323
PIR I50589
S35941
RefSeq NP_990481.1
UniGene Gga.524
ProteinModelPortal Q08727
SMR Q08727
Ensembl ENSGALT00000018004
ENSGALT00000043590
GeneID 396055
KEGG gga:396055
CTD 3199
GeneTree ENSGT00760000118940
HOVERGEN HBG006088
InParanoid Q08727
KO K09302
OMA NCGSGLN
PhylomeDB Q08727
NextBio 20816115
PRO PR:Q08727
Proteomes UP000000539
GO GO:0005654
GO:0000978
GO:0001078
GO:0009952
GO:0035284
GO:0001709
GO:0071300
GO:0009953
GO:0048703
GO:0042474
GO:0008045
GO:0045665
GO:0045668
GO:0002076
GO:0045944
GO:0021568
GO:0021658
GO:0007379
GO:0006351
Gene3D 1.10.10.60
InterPro IPR001827
IPR017970
IPR001356
IPR020479
IPR009057
Pfam PF00046
PRINTS PR00024
SMART SM00389
SUPFAM SSF46689
PROSITE PS00032
PS00027
PS50071

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0048704

embryonic skeletal system morphogenesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96174
MGI:MGI:96175
MGI:MGI:96184
MGI:MGI:96207
PANTHER:PTN002903063

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000166
FB:FBgn0004053
MGI:MGI:102851
MGI:MGI:96174
PANTHER:PTN002518688
RGD:62387
UniProtKB:P14651
UniProtKB:P14652
UniProtKB:P31249

P

Seeded From UniProt

complete

involved_in

GO:0009952

anterior/posterior pattern specification

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96174
MGI:MGI:96175
MGI:MGI:96184
MGI:MGI:96207
PANTHER:PTN002903063

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0051481
MGI:MGI:102851
MGI:MGI:96174
PANTHER:PTN002518688
RGD:62387
UniProtKB:O43364
UniProtKB:P14652

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000166
MGI:MGI:102851
MGI:MGI:96175
PANTHER:PTN002518688
RGD:62387

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:102851
MGI:MGI:96174
MGI:MGI:96184
PANTHER:PTN002518688
UniProtKB:P14651

F

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96174
MGI:MGI:96184
PANTHER:PTN001215678

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001356
InterPro:IPR001827
InterPro:IPR009057
InterPro:IPR020479

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001827

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001827
InterPro:IPR017970

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017970

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037
GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238
UniProtKB-KW:KW-0371

F

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page