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CHICK:H2AZ

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) H2AFZ
Protein Name(s) Histone H2A.Z

H2A/z

External Links
UniProt Q5ZMD6
EMBL AJ719448
RefSeq NP_001026545.1
UniGene Gga.4671
ProteinModelPortal Q5ZMD6
SMR Q5ZMD6
BioGrid 686040
STRING 9031.ENSGALP00000028277
PRIDE Q5ZMD6
Ensembl ENSGALT00000028340
GeneID 426361
KEGG gga:426361
CTD 3015
GeneTree ENSGT00710000106735
HOVERGEN HBG009342
InParanoid Q5ZMD6
KO K11251
OMA IHKSLMN
OrthoDB EOG7M0NTR
PhylomeDB Q5ZMD6
TreeFam TF354232
NextBio 20827985
PRO PR:Q5ZMD6
Proteomes UP000000539
GO GO:0070062
GO:0005719
GO:0005720
GO:0000786
GO:0031490
GO:0000978
GO:0000979
GO:0000980
GO:0071392
GO:0045944
Gene3D 1.10.20.10
InterPro IPR009072
IPR007125
IPR002119
Pfam PF00125
PRINTS PR00620
SMART SM00414
SUPFAM SSF47113
PROSITE PS00046

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0006325

chromatin organization

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2448285
PANTHER:PTN000604564
PomBase:SPBC11B10.10c

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

CGD:CAL0000179664
PANTHER:PTN000604564
UniProtKB:O97320
UniProtKB:Q7L7L0

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:102688
PANTHER:PTN000604564
SGD:S000005372
UniProtKB:O75367
UniProtKB:Q9P0M6

C

Seeded From UniProt

complete

involved_in

GO:0071392

cellular response to estradiol stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

P

Seeded From UniProt

complete

enables

GO:0031492

nucleosomal DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

F

Seeded From UniProt

complete

enables

GO:0031490

chromatin DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

F

Seeded From UniProt

complete

part_of

GO:0005720

nuclear heterochromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

C

Seeded From UniProt

complete

part_of

GO:0005719

nuclear euchromatin

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

C

Seeded From UniProt

complete

enables

GO:0000980

RNA polymerase II distal enhancer sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

F

Seeded From UniProt

complete

enables

GO:0000979

RNA polymerase II core promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S5
ensembl:ENSP00000296417

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P0C0S6
ensembl:ENSMUSP00000036907

C

Seeded From UniProt

complete

part_of

GO:0000786

nucleosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002119
InterPro:IPR007125

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002119
InterPro:IPR007125

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002119

C

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009072

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0000786

nucleosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0544

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page