CHICK:FPPS

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	FDPS
Protein Name(s)	Farnesyl pyrophosphate synthase FPP synthase FPS (2E,6E)-farnesyl diphosphate synthase Dimethylallyltranstransferase Farnesyl diphosphate synthase Geranyltranstransferase
External Links
UniProt	P08836
PDB	1FPS 1UBV 1UBW 1UBX 1UBY
PDBsum	1FPS 1UBV 1UBW 1UBX 1UBY
ProteinModelPortal	P08836
SMR	P08836
HOVERGEN	HBG005741
InParanoid	P08836
PhylomeDB	P08836
UniPathway	UPA00259 UPA00260
EvolutionaryTrace	P08836
Proteomes	UP000000539
GO	GO:0005737 GO:0004161 GO:0004337 GO:0046872 GO:0006695 GO:0045337 GO:0033384
Gene3D	1.10.600.10
InterPro	IPR008949 IPR000092
Pfam	PF00348
SUPFAM	SSF48576
PROSITE	PS00723 PS00444

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0004337	geranyltranstransferase activity	PMID:24206759	ECO:0000314			F		According to figure 4, fdps genes were upregulated in abdominal fat, subcutaneous fat, and breast muscle tissues in WRR male chickens as opposed to XH male chickens. It can be inferred that the fast growing WRR chickens gain fat and muscle quicker as a result of abnormally upregulated genes, including fdps. Fdps plays a key role in fat and muscle development.	complete CACAO 9804
involved_in	GO:0045337	farnesyl diphosphate biosynthetic process		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000162949 RGD:68953 SGD:S000003703 TAIR:locus:2160947 UniProtKB:Q43315	P		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000162949 SGD:S000003703	C		Seeded From UniProt	complete
enables	GO:0004337	geranyltranstransferase activity		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000162949 PomBase:SPAC6F12.13c RGD:68953 SGD:S000003703 TAIR:locus:2160947 UniProtKB:Q43315	F		Seeded From UniProt	complete
enables	GO:0004161	dimethylallyltranstransferase activity		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000162949 SGD:S000003703 TAIR:locus:2160947 UniProtKB:Q43315	F		Seeded From UniProt	complete
enables	GO:0004161	dimethylallyltranstransferase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039702	F		Seeded From UniProt	complete
enables	GO:0004337	geranyltranstransferase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039702	F		Seeded From UniProt	complete
involved_in	GO:0008299	isoprenoid biosynthetic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000092	P		Seeded From UniProt	complete
involved_in	GO:0033384	geranyl diphosphate biosynthetic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039702	P		Seeded From UniProt	complete
involved_in	GO:0045337	farnesyl diphosphate biosynthetic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR039702	P		Seeded From UniProt	complete
enables	GO:0004337	geranyltranstransferase activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	[http://www.expasy.org/cgi-bin/nicezyme.pl?2.5.1.1 EC:2.5.1.10]	F		Seeded From UniProt	complete
enables	GO:0004161	dimethylallyltranstransferase activity	GO_REF:0000003	ECO:0000501	evidence used in automatic assertion	EC:2.5.1.1	F		Seeded From UniProt	complete
involved_in	GO:0008202	steroid metabolic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0753	P		Seeded From UniProt	complete
involved_in	GO:0008299	isoprenoid biosynthetic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0414	P		Seeded From UniProt	complete
involved_in	GO:0006695	cholesterol biosynthetic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0152	P		Seeded From UniProt	complete
involved_in	GO:0006629	lipid metabolic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0443	P		Seeded From UniProt	complete
involved_in	GO:0008203	cholesterol metabolic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0153	P		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C		Seeded From UniProt	complete
enables	GO:0016740	transferase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0808	F		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F		Seeded From UniProt	complete
involved_in	GO:0016126	sterol biosynthetic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0756	P		Seeded From UniProt	complete
involved_in	GO:0006694	steroid biosynthetic process	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0752	P		Seeded From UniProt	complete
involved_in	GO:0033384	geranyl diphosphate biosynthetic process	GO_REF:0000041	ECO:0000322	imported manually asserted information used in automatic assertion	UniPathway:UPA00259	P		Seeded From UniProt	complete
involved_in	GO:0045337	farnesyl diphosphate biosynthetic process	GO_REF:0000041	ECO:0000322	imported manually asserted information used in automatic assertion	UniPathway:UPA00260	P		Seeded From UniProt	complete
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References

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