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CHICK:DPF3

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) DPF3 (synonyms: CERD4)
Protein Name(s) Zinc finger protein DPF3

Zinc finger protein cer-d4

External Links
UniProt P58270
EMBL AF362754
AF362753
AF362756
AF362755
RefSeq NP_989970.1
UniGene Gga.46
ProteinModelPortal P58270
STRING 9031.ENSGALP00000015213
PaxDb P58270
GeneID 395351
KEGG gga:395351
CTD 8110
eggNOG NOG271547
HOGENOM HOG000217918
HOVERGEN HBG004475
InParanoid P58270
PhylomeDB P58270
NextBio 20815436
PRO PR:P58270
Proteomes UP000000539
GO GO:0005634
GO:0008270
GO:0016568
GO:0007399
GO:0006355
GO:0006351
Gene3D 3.30.40.10
InterPro IPR025750
IPR007087
IPR015880
IPR011011
IPR001965
IPR019787
IPR001841
IPR013083
Pfam PF00628
PF14051
SMART SM00249
SM00184
SM00355
SUPFAM SSF57903
PROSITE PS01359
PS50016
PS00028
PS50157

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0071565

nBAF complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1352748
MGI:MGI:1917377
PANTHER:PTN000064899

C

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028387
MGI:MGI:1932051
PANTHER:PTN000064894
RGD:1566399
RGD:621061
UniProtKB:O95251
UniProtKB:Q92993

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0087008
PANTHER:PTN000064894
UniProtKB:Q8WYB5
UniProtKB:Q92794
UniProtKB:Q92993
UniProtKB:Q96T23
UniProtKB:Q9H7Z6
WB:WBGene00007029

P

Seeded From UniProt

complete

enables

GO:0042393

histone binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000064894
UniProtKB:Q96T23

F

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1352748
MGI:MGI:1917377
PANTHER:PTN000064899
RGD:61868

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014340
FB:FBgn0026080
FB:FBgn0026577
FB:FBgn0028387
FB:FBgn0087008
MGI:MGI:109529
MGI:MGI:2442415
PANTHER:PTN000064894
RGD:1304892
RGD:1566399
RGD:621061
TAIR:locus:2144776
TAIR:locus:2144841
TAIR:locus:2169779
TAIR:locus:2174764
UniProtKB:O95251
UniProtKB:Q6ZJM9
UniProtKB:Q8III2
UniProtKB:Q8WUB8
UniProtKB:Q92794
UniProtKB:Q92993
UniProtKB:Q96T23
UniProtKB:Q9H7Z6

C

Seeded From UniProt

complete

enables

GO:0004402

histone acetyltransferase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0014340
FB:FBgn0026080
MGI:MGI:1858746
PANTHER:PTN000064894
SGD:S000000148
SGD:S000004734
SGD:S000005770
TAIR:locus:2144776
TAIR:locus:2174764
UniProtKB:Q8III2
UniProtKB:Q8WYB5
UniProtKB:Q92794
UniProtKB:Q92993
UniProtKB:Q9H7Z6
ZFIN:ZDB-GENE-021022-3

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000064894
PomBase:SPAC17G8.13c
RGD:621061
SGD:S000004734
SGD:S000005770
ZFIN:ZDB-GENE-021022-3

C

Seeded From UniProt

complete

part_of

GO:0000123

histone acetyltransferase complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0026080
PANTHER:PTN000064894
UniProtKB:O95251
UniProtKB:Q9H7Z6

C

Seeded From UniProt

complete

involved_in

GO:0016573

histone acetylation

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0004402

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:F8W7T1
ensembl:ENSP00000479526

C

Seeded From UniProt

complete

part_of

GO:0071565

nBAF complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P58269
ensembl:ENSMUSP00000136280

C

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P58269
ensembl:ENSMUSP00000136280

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013087

F

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR038047

F

Seeded From UniProt

complete

part_of

GO:0071565

nBAF complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR038047

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0524

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page