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CHICK:DKC1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) DKC1
Protein Name(s) H/ACA ribonucleoprotein complex subunit 4

Dyskerin

External Links
UniProt Q5ZJH9
EMBL AJ720455
RefSeq NP_001026286.1
UniGene Gga.1015
ProteinModelPortal Q5ZJH9
STRING 9031.ENSGALP00000008091
PaxDb Q5ZJH9
PRIDE Q5ZJH9
GeneID 422196
KEGG gga:422196
CTD 1736
eggNOG COG0130
HOGENOM HOG000231224
HOVERGEN HBG081442
InParanoid Q5ZJH9
KO K11131
PhylomeDB Q5ZJH9
Reactome REACT_116053
NextBio 20824864
PRO PR:Q5ZJH9
Proteomes UP000000539
GO GO:0005730
GO:0005654
GO:0030529
GO:0009982
GO:0003723
GO:0001522
GO:0006364
GO:0000723
GO:0007004
Gene3D 2.30.130.10
InterPro IPR012960
IPR002501
IPR020103
IPR002478
IPR015947
IPR004802
IPR004521
PANTHER PTHR23127
Pfam PF08068
PF01472
PF01509
SMART SM00359
SUPFAM SSF55120
SSF88697
TIGRFAMs TIGR00425
TIGR00451
PROSITE PS50890

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005697

telomerase holoenzyme complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O60832

C

Seeded From UniProt

complete

involved_in

GO:0007004

telomere maintenance via telomerase

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O60832

P

Seeded From UniProt

complete

enables

GO:0009982

pseudouridine synthase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O60832

F

Seeded From UniProt

complete

involved_in

GO:0000455

enzyme-directed rRNA pseudouridine synthesis

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O60832

P

Seeded From UniProt

complete

involved_in

GO:1990481

mRNA pseudouridine synthesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000565614
SGD:S000004165

P

Seeded From UniProt

complete

part_of

GO:0031429

box H/ACA snoRNP complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000565614
RGD:621780
SGD:S000004165
UniProtKB:O60832

C

Seeded From UniProt

complete

involved_in

GO:0031120

snRNA pseudouridine synthesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000565614
SGD:S000004165

P

Seeded From UniProt

complete

involved_in

GO:0031118

rRNA pseudouridine synthesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1861727
PANTHER:PTN000565614
SGD:S000004165

P

Seeded From UniProt

complete

enables

GO:0009982

pseudouridine synthase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000565614
SGD:S000004165

F

Seeded From UniProt

complete

involved_in

GO:0000495

box H/ACA snoRNA 3'-end processing

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000565614
SGD:S000004165

P

Seeded From UniProt

complete

involved_in

GO:0001522

pseudouridine synthesis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020103

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002478
InterPro:IPR004521
InterPro:IPR020103

F

Seeded From UniProt

complete

involved_in

GO:0006396

RNA processing

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002501
InterPro:IPR004802

P

Seeded From UniProt

complete

involved_in

GO:0009451

RNA modification

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020103

P

Seeded From UniProt

complete

enables

GO:0009982

pseudouridine synthase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020103

F

Seeded From UniProt

complete

involved_in

GO:0007004

telomere maintenance via telomerase

Reactome:R-GGA-417076

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-GGA-417114

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006364

rRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0698

P

Seeded From UniProt

complete

involved_in

GO:0042254

ribosome biogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0690

P

Seeded From UniProt

complete

enables

GO:0016853

isomerase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0413

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0188

C

Seeded From UniProt

complete

part_of

GO:0015030

Cajal body

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0031

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page