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CHICK:DHX30

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) DHX30
Protein Name(s) Putative ATP-dependent RNA helicase DHX30

DEAH box protein 30

External Links
UniProt Q5ZI74
EMBL AJ720910
RefSeq NP_001012869.1
UniGene Gga.2762
ProteinModelPortal Q5ZI74
SMR Q5ZI74
STRING 9031.ENSGALP00000008031
PaxDb Q5ZI74
GeneID 420376
KEGG gga:420376
CTD 22907
eggNOG COG1643
HOGENOM HOG000112212
HOVERGEN HBG081437
InParanoid Q5ZI74
KO K13185
PhylomeDB Q5ZI74
NextBio 20823291
PRO PR:Q5ZI74
Proteomes UP000000539
GO GO:0042645
GO:0005524
GO:0008026
GO:0003682
GO:0003723
Gene3D 3.40.50.300
InterPro IPR011545
IPR002464
IPR014720
IPR011709
IPR007502
IPR014001
IPR001650
IPR027417
Pfam PF00270
PF00035
PF04408
PF00271
PF07717
SMART SM00487
SM00847
SM00490
SUPFAM SSF52540
PROSITE PS00690
PS51192
PS51194

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005737

cytoplasm

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99PU8

C

Seeded From UniProt

complete

enables

GO:0004004

ATP-dependent RNA helicase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99PU8

F

Seeded From UniProt

complete

involved_in

GO:0007417

central nervous system development

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q99PU8

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q7L2E3

F

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q7L2E3

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q7L2E3

C

Seeded From UniProt

complete

enables

GO:0004004

ATP-dependent RNA helicase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q7L2E3

F

Seeded From UniProt

complete

part_of

GO:0042645

mitochondrial nucleoid

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q7L2E3

C

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q7L2E3

F

Seeded From UniProt

complete

enables

GO:0034459

ATP-dependent 3'-5' RNA helicase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001449167
UniProtKB:Q08211

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002774
FB:FBgn0003483
MGI:MGI:1921941
PANTHER:PTN000717298
TAIR:locus:2009200
UniProtKB:Q08211
UniProtKB:Q8NDG6
UniProtKB:Q9H2U1

C

Seeded From UniProt

complete

enables

GO:0004003

ATP-dependent DNA helicase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0032883
PANTHER:PTN001053965

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0002774
PANTHER:PTN000433338
PomBase:SPBC1711.17
UniProtKB:Q08211
UniProtKB:Q28141

F

Seeded From UniProt

complete

enables

GO:0002151

G-quadruplex RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0032883
PANTHER:PTN001053965
UniProtKB:Q9H2U1

F

Seeded From UniProt

complete

involved_in

GO:0032508

DNA duplex unwinding

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0004003

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011545

F

Seeded From UniProt

complete

enables

GO:0004386

helicase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR007502

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011545

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0496
UniProtKB-SubCell:SL-0173

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

enables

GO:0004386

helicase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0347

F

Seeded From UniProt

complete

involved_in

GO:0042254

ribosome biogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0690

P

Seeded From UniProt

complete

part_of

GO:0042645

mitochondrial nucleoid

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1135
UniProtKB-SubCell:SL-0269

C

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page