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CHICK:DCR1C

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) DCLRE1C (synonyms: SNM1C)
Protein Name(s) Protein artemis

DNA cross-link repair 1C protein SNM1 homolog C chSNM1C SNM1-like protein

External Links
UniProt Q5QJC2
EMBL AY376898
RefSeq NP_001026765.1
UniGene Gga.22874
ProteinModelPortal Q5QJC2
STRING 9031.ENSGALP00000022533
PaxDb Q5QJC2
GeneID 430764
KEGG gga:430764
CTD 64421
eggNOG COG1236
HOGENOM HOG000231568
HOVERGEN HBG081421
InParanoid Q5QJC2
KO K10887
PhylomeDB Q5QJC2
NextBio 20830567
PRO PR:Q5QJC2
Proteomes UP000000539
GO GO:0005634
GO:0004519
GO:0004527
GO:0006310
GO:0006281
GO:0002376
Gene3D 3.60.15.10
InterPro IPR001279
IPR011084
Pfam PF07522
SMART SM00849
SUPFAM SSF56281

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0070419

nonhomologous end joining complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q96SD1

C

Seeded From UniProt

complete

involved_in

GO:0036297

interstrand cross-link repair

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000581728
PomBase:SPAC22A12.01c
SGD:S000004745
UniProtKB:Q9H816

P

Seeded From UniProt

complete

enables

GO:0035312

5'-3' exodeoxyribonuclease activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000581728
UniProtKB:Q6PJP8

F

Seeded From UniProt

complete

involved_in

GO:0031848

protection from non-homologous end joining at telomere

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2156057
PANTHER:PTN000581728
UniProtKB:Q9H816

P

Seeded From UniProt

complete

involved_in

GO:0006303

double-strand break repair via nonhomologous end joining

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000581728
dictyBase:DDB_G0277755

P

Seeded From UniProt

complete

enables

GO:0003684

damaged DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000581728
SGD:S000004745

F

Seeded From UniProt

complete

part_of

GO:0000784

nuclear chromosome, telomeric region

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000581728
UniProtKB:Q9H816

C

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0008409

P

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0035312

P

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004519

P

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004527

P

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004518

P

Seeded From UniProt

complete

involved_in

GO:0051276

chromosome organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8K4J0
ensembl:ENSMUSP00000100053

P

Seeded From UniProt

complete

involved_in

GO:0033151

V(D)J recombination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8K4J0
ensembl:ENSMUSP00000100053

P

Seeded From UniProt

complete

involved_in

GO:0030183

B cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8K4J0
ensembl:ENSMUSP00000100053

P

Seeded From UniProt

complete

involved_in

GO:0010212

response to ionizing radiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8K4J0
ensembl:ENSMUSP00000100053

P

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8K4J0
ensembl:ENSMUSP00000100053

P

Seeded From UniProt

complete

involved_in

GO:0006302

double-strand break repair

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8K4J0
ensembl:ENSMUSP00000100053

P

Seeded From UniProt

complete

involved_in

GO:0000723

telomere maintenance

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q8K4J0
ensembl:ENSMUSP00000100053

P

Seeded From UniProt

complete

part_of

GO:0070419

nonhomologous end joining complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q96SD1
ensembl:ENSP00000367527

C

Seeded From UniProt

complete

enables

GO:0008409

5'-3' exonuclease activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q96SD1
ensembl:ENSP00000367527

F

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q96SD1
ensembl:ENSP00000367527

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q96SD1
ensembl:ENSP00000367527

C

Seeded From UniProt

complete

enables

GO:0000014

single-stranded DNA endodeoxyribonuclease activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q96SD1
ensembl:ENSP00000367527

F

Seeded From UniProt

complete

enables

GO:0004519

endonuclease activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0255

F

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

enables

GO:0004518

nuclease activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0540

F

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0233

P

Seeded From UniProt

complete

enables

GO:0004527

exonuclease activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0269

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0002250

adaptive immune response

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1064

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

involved_in

GO:0002376

immune system process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0391

P

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page