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CHICK:CELF1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) CELF1 (synonyms: BRUL, CUGBP1)
Protein Name(s) CUGBP Elav-like family member 1

CELF-1 Bruno-like protein 2 CUG triplet repeat RNA-binding protein 1 CUG-BP1 CUG-BP- and ETR-3-like factor 1 RNA-binding protein BRUNOL-2

External Links
UniProt Q5F3T7
EMBL AJ851563
AB050497
RefSeq NP_001012539.1
UniGene Gga.14943
Gga.56092
ProteinModelPortal Q5F3T7
SMR Q5F3T7
STRING 9031.ENSGALP00000013128
PRIDE Q5F3T7
GeneID 373923
KEGG gga:373923
CTD 10658
eggNOG NOG251494
HOGENOM HOG000004754
HOVERGEN HBG107646
InParanoid Q5F3T7
KO K13207
PhylomeDB Q5F3T7
NextBio 20813455
PRO PR:Q5F3T7
Proteomes UP000000539
GO GO:0005737
GO:0005634
GO:0000166
GO:0003723
GO:0006397
GO:0008380
Gene3D 3.30.70.330
InterPro IPR012677
IPR000504
Pfam PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:1990904

ribonucleoprotein complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0265297
PANTHER:PTN002768817
UniProtKB:P11940
UniProtKB:Q13310

C

Seeded From UniProt

complete

involved_in

GO:0006376

mRNA splice site selection

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1338822
MGI:MGI:1342295
MGI:MGI:1932407
PANTHER:PTN002769004
UniProtKB:O95319
UniProtKB:Q92879

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000114
MGI:MGI:1338822
MGI:MGI:1342295
MGI:MGI:1923433
MGI:MGI:1926034
MGI:MGI:1932407
PANTHER:PTN000609546
TAIR:locus:2139340
UniProtKB:Q5SZQ8
UniProtKB:Q7T2T1
UniProtKB:Q8IDB7
UniProtKB:Q8IUH3

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000114
MGI:MGI:1338822
MGI:MGI:1342295
MGI:MGI:1926034
MGI:MGI:1932407
PANTHER:PTN000609546
UniProtKB:O95319
UniProtKB:Q5SZQ8
UniProtKB:Q7T2T1
UniProtKB:Q8IDB7
UniProtKB:Q8IUH3
UniProtKB:Q92879
UniProtKB:Q9BZC1

C

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1932407
PANTHER:PTN000609546
TAIR:locus:2139340
UniProtKB:Q92879

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000114
FB:FBgn0264001
MGI:MGI:1926034
PANTHER:PTN002768817
PomBase:SPAC1610.03c
RGD:68347
SGD:S000005846
UniProtKB:O04425
UniProtKB:P0DJD4
UniProtKB:P11940
UniProtKB:Q5SZQ8
UniProtKB:Q8IDB7
UniProtKB:Q8IUH3
UniProtKB:Q92879

F

Seeded From UniProt

complete

involved_in

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000114
PANTHER:PTN002769004
UniProtKB:Q5SZQ8
UniProtKB:Q8N6W0
UniProtKB:Q96J87
UniProtKB:Q9BZC1
WB:WBGene00006807

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page