CHICK:CDX1

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	CDX1 (synonyms: CDXA)
Protein Name(s)	Homeobox protein CDX-1 Caudal-type homeodomain protein
External Links
UniProt	Q9DEB6
EMBL	AB046532
RefSeq	NP_990007.2
UniGene	Gga.210
ProteinModelPortal	Q9DEB6
SMR	Q9DEB6
STRING	9031.ENSGALP00000009094
Ensembl	ENSGALT00000009108
GeneID	395397
KEGG	gga:395397
CTD	1044
eggNOG	NOG291290
GeneTree	ENSGT00530000063388
HOGENOM	HOG000115975
HOVERGEN	HBG005302
InParanoid	Q9DEB6
KO	K09312
OMA	YPDFPSY
OrthoDB	EOG71P2BK
PhylomeDB	Q9DEB6
TreeFam	TF351605
NextBio	20815481
PRO	PR:Q9DEB6
Proteomes	UP000000539
ExpressionAtlas	Q9DEB6
GO	GO:0005634 GO:0043565 GO:0007275 GO:0006355
Gene3D	1.10.10.60
InterPro	IPR006820 IPR017970 IPR001356 IPR020479 IPR009057 IPR000047
Pfam	PF04731 PF00046
PRINTS	PR00024 PR00031
SMART	SM00389
SUPFAM	SSF46689
PROSITE	PS00027 PS50071

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
enables	GO:0008327	methyl-CpG binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P47902	F		Seeded From UniProt	complete
enables	GO:0044212	transcription regulatory region DNA binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P47902	F		Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P47902	P		Seeded From UniProt	complete
involved_in	GO:0030154	cell differentiation		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88361 PANTHER:PTN001216652	P		Seeded From UniProt	complete
involved_in	GO:0009948	anterior/posterior axis specification		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN001216652 ZFIN:ZDB-GENE-980526-330	P		Seeded From UniProt	complete
involved_in	GO:0006357	regulation of transcription by RNA polymerase II		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88361 PANTHER:PTN001216652	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0000251 MGI:MGI:88361 PANTHER:PTN001216652 RGD:621234 WB:WBGene00003912	C		Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0000251 MGI:MGI:88360 MGI:MGI:88361 PANTHER:PTN001216652 RGD:621234	F		Seeded From UniProt	complete
enables	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0000251 PANTHER:PTN001216652 WB:WBGene00003912	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR020479	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006820	C		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006820 InterPro:IPR017970	P		Seeded From UniProt	complete
involved_in	GO:0007275	multicellular organism development	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006820	P		Seeded From UniProt	complete
enables	GO:0043565	sequence-specific DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR017970	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037 GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238 UniProtKB-KW:KW-0371	F		Seeded From UniProt	complete
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References

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