CHICK:CALB1

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	CALB1
Protein Name(s)	Calbindin Calbindin D28 D-28K Vitamin D-dependent calcium-binding protein, avian-type
External Links
UniProt	P04354
EMBL	X03343 M14230 M31143 M31139 M31140 M31141 M31142 X06629 X06630 X06631 X06632 X06633
PIR	A40926
RefSeq	NP_990844.1
UniGene	Gga.3286
ProteinModelPortal	P04354
SMR	P04354
BioGrid	676764
IntAct	P04354
STRING	9031.ENSGALP00000026395
PaxDb	P04354
Ensembl	ENSGALT00000026445
GeneID	396519
KEGG	gga:396519
CTD	793
eggNOG	NOG299305
GeneTree	ENSGT00390000013118
HOGENOM	HOG000231866
HOVERGEN	HBG000855
InParanoid	P04354
KO	K14757
OMA	MLQVFDA
OrthoDB	EOG71G9VB
PhylomeDB	P04354
TreeFam	TF325083
NextBio	20816556
PRO	PR:P04354
Proteomes	UP000000539
ExpressionAtlas	P04354
GO	GO:0005829 GO:0030425 GO:0070062 GO:0043025 GO:0005634 GO:0045211 GO:0012506 GO:0005509 GO:0005499 GO:0008270 GO:0006816 GO:0006874 GO:0071310 GO:0007626 GO:0007616 GO:0072205 GO:0072286 GO:0072221 GO:0035502 GO:0010842 GO:0019233 GO:0007614
Gene3D	1.10.238.10
InterPro	IPR029634 IPR011992 IPR018247 IPR002048
PANTHER	PTHR19972:SF3
Pfam	PF00036 PF13202 PF13405
SMART	SM00054
PROSITE	PS00018 PS50222

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
enables	GO:0005509	calcium ion binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P05937	F	Seeded From UniProt	complete
part_of	GO:0045211	postsynaptic membrane	PMID:15827379^[1]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0019233	sensory perception of pain	PMID:15827379^[1]	ECO:0000303	author statement without traceable support used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0012506	vesicle membrane	PMID:1659521^[2]	ECO:0000303	author statement without traceable support used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0006874	cellular calcium ion homeostasis	PMID:12597618^[3]	ECO:0000303	author statement without traceable support used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006816	calcium ion transport	PMID:1659521^[2]	ECO:0000303	author statement without traceable support used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:1900271	regulation of long-term synaptic potentiation	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88248 PANTHER:PTN000463232	P	Seeded From UniProt	complete
involved_in	GO:0099509	regulation of presynaptic cytosolic calcium ion concentration	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000463232 RGD:69340	P	Seeded From UniProt	complete
part_of	GO:0045202	synapse	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88248 PANTHER:PTN001461922	C	Seeded From UniProt	complete
part_of	GO:0043197	dendritic spine	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000463289 RGD:69340	C	Seeded From UniProt	complete
part_of	GO:0043005	neuron projection	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88248 PANTHER:PTN001461922	C	Seeded From UniProt	complete
part_of	GO:0030425	dendrite	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88248 PANTHER:PTN000463232 UniProtKB:P05937	C	Seeded From UniProt	complete
part_of	GO:0005829	cytosol	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88248 PANTHER:PTN001461922 UniProtKB:P22676	C	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88248 PANTHER:PTN001461922 RGD:620981 RGD:69340 UniProtKB:P05937	C	Seeded From UniProt	complete
enables	GO:0005509	calcium ion binding	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:88248 PANTHER:PTN001461922 RGD:620981 RGD:69340 UniProtKB:P05937	F	Seeded From UniProt	complete
part_of	GO:0098793	presynapse	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0099509	C	Seeded From UniProt	complete
involved_in	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0099567	P	Seeded From UniProt	complete
part_of	GO:0043025	neuronal cell body	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	C	Seeded From UniProt	complete
part_of	GO:0030425	dendrite	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	C	Seeded From UniProt	complete
part_of	GO:0030424	axon	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	C	Seeded From UniProt	complete
enables	GO:0008270	zinc ion binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	F	Seeded From UniProt	complete
involved_in	GO:0007616	long-term memory	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	P	Seeded From UniProt	complete
involved_in	GO:0007614	short-term memory	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	C	Seeded From UniProt	complete
enables	GO:0005509	calcium ion binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P05937 ensembl:ENSP00000265431	F	Seeded From UniProt	complete
involved_in	GO:1900271	regulation of long-term synaptic potentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
enables	GO:0099567	calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	F	Seeded From UniProt	complete
enables	GO:0099534	calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	F	Seeded From UniProt	complete
part_of	GO:0098982	GABA-ergic synapse	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0098978	glutamatergic synapse	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0098686	hippocampal mossy fiber to CA3 synapse	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
involved_in	GO:0072286	metanephric connecting tubule development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
involved_in	GO:0072221	metanephric distal convoluted tubule development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
involved_in	GO:0072205	metanephric collecting duct development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
involved_in	GO:0071310	cellular response to organic substance	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
involved_in	GO:0060041	retina development in camera-type eye	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
part_of	GO:0045202	synapse	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0044297	cell body	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0043025	neuronal cell body	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0043005	neuron projection	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
involved_in	GO:0035502	metanephric part of ureteric bud development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
part_of	GO:0030425	dendrite	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0030424	axon	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
involved_in	GO:0010842	retina layer formation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
involved_in	GO:0007626	locomotory behavior	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	P	Seeded From UniProt	complete
part_of	GO:0005829	cytosol	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	C	Seeded From UniProt	complete
enables	GO:0005509	calcium ion binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P12658 ensembl:ENSMUSP00000029876	F	Seeded From UniProt	complete
enables	GO:0005509	calcium ion binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002048 InterPro:IPR029634	F	Seeded From UniProt	complete
involved_in	GO:0055074	calcium ion homeostasis	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR029634	P	Seeded From UniProt	complete
involved_in	GO:0006816	calcium ion transport	PMID:15468049^[5]	ECO:0000304	author statement supported by traceable reference used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F	Seeded From UniProt	complete
enables	GO:0005499	vitamin D binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0848	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Li, YN et al. (2005) An immunocytochemical study of calbindin-D28K in laminae I and II of the dorsal horn and spinal ganglia in the chicken with special reference to the relation to substance P-containing primary afferent neurons. Arch. Histol. Cytol. 68 57-70 PubMed GONUTS page
↑ ^2.0 ^2.1 Nemere, I et al. (1991) Redistribution of calbindin-D28k in chick intestine in response to calcium transport. Endocrinology 129 2972-84 PubMed GONUTS page
↑ Tolosa de Talamoni, N et al. (2002) Comparative immunolocalization of the plasma membrane calcium pump and calbindin D28K in chicken retina during embryonic development. Eur J Histochem 46 333-40 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 ^4.6 ^4.7 ^4.8 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
↑ Ecay, TW et al. (2004) Expression of calbindin-D28K by yolk sac and chorioallantoic membranes of the corn snake, Elaphe guttata. J. Exp. Zool. B Mol. Dev. Evol. 302 517-25 PubMed GONUTS page

[PMID:15827379-1] 1.0 ^1.1 Li, YN et al. (2005) An immunocytochemical study of calbindin-D28K in laminae I and II of the dorsal horn and spinal ganglia in the chicken with special reference to the relation to substance P-containing primary afferent neurons. Arch. Histol. Cytol. 68 57-70 PubMed GONUTS page

[PMID:1659521-2] 2.0 ^2.1 Nemere, I et al. (1991) Redistribution of calbindin-D28k in chick intestine in response to calcium transport. Endocrinology 129 2972-84 PubMed GONUTS page

[PMID:12597618-3] Tolosa de Talamoni, N et al. (2002) Comparative immunolocalization of the plasma membrane calcium pump and calbindin D28K in chicken retina during embryonic development. Eur J Histochem 46 333-40 PubMed GONUTS page

[PMID:21873635-4] 4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 ^4.6 ^4.7 ^4.8 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:15468049-5] Ecay, TW et al. (2004) Expression of calbindin-D28K by yolk sac and chorioallantoic membranes of the corn snake, Elaphe guttata. J. Exp. Zool. B Mol. Dev. Evol. 302 517-25 PubMed GONUTS page

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CHICK:CALB1

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