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BPT5:DECO
Contents
| Species (Taxon ID) | Escherichia phage T5 (Enterobacteria phage T5). (10726) | |
| Gene Name(s) | N5 (ECO:0000312 with EMBL:AAU05286.1) | |
| Protein Name(s) | Decoration protein (ECO:0000303 with PMID:24198424[1])
Capsid protein pb10 | |
| External Links | ||
| UniProt | Q6QGD6 | |
| EMBL | AY543070 AY692264 AY587007 | |
| RefSeq | YP_006979.1 | |
| ProteinModelPortal | Q6QGD6 | |
| GeneID | 2777675 | |
| KEGG | vg:2777675 | |
| OrthoDB | VOG09000292 | |
| Proteomes | UP000002107 UP000002141 UP000002503 | |
| GO | GO:0098021 | |
| Gene3D | 2.60.40.10 | |
| InterPro | IPR007110 IPR013783 | |
| Pfam | PF13895 | |
| SUPFAM | SSF48726 | |
| PROSITE | PS50835 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0098021 |
viral capsid, decoration |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
| GO:0098021 |
viral capsid, decoration |
ECO:0000314 |
C |
An association assay was performed to test the decoration capabilities of pb10 on the T5 capsid. Figure 4 shows that the N-terminal domain of pb10 is responsible for interacting with the capsid. Figure 5 further exhibits a high affinity between the protein and the capsid through an SPR experiment. Overall, these data provide evidence for the decorating capabilities of pb10. |
complete | |||||
|
part_of |
GO:0019012 |
virion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0019028 |
viral capsid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0098021 |
viral capsid, decoration |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Zivanovic, Y et al. (2014) Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components. J. Virol. 88 1162-74 PubMed GONUTS page
- ↑ Effantin, G et al. (2006) Bacteriophage T5 structure reveals similarities with HK97 and T4 suggesting evolutionary relationships. J. Mol. Biol. 361 993-1002 PubMed GONUTS page
- ↑ Vernhes, E et al. (2017) High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid. Sci Rep 7 41662 PubMed GONUTS page
