GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

BACSU:CSOR

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Bacillus subtilis (strain 168). (224308)
Gene Name(s) csoR (synonyms: yvgZ)
Protein Name(s) Copper-sensing transcriptional repressor CsoR

Copper-sensitive operon repressor

External Links
UniProt O32222
EMBL AL009126
PIR G70041
RefSeq NP_391232.1
ProteinModelPortal O32222
SMR O32222
STRING 224308.BSU33520
PaxDb O32222
DNASU 936038
EnsemblBacteria CAB15357
GeneID 936038
KEGG bsu:BSU33520
PATRIC 18978706
GenoList BSU33520
eggNOG COG1937
HOGENOM HOG000023915
InParanoid O32222
OMA DKYCVDI
OrthoDB EOG600DWQ
PhylomeDB O32222
BioCyc BSUB:BSU33520-MONOMER
RETL1328306-WGS:GSTH-6074-MONOMER
Proteomes UP000001570
GO GO:0005737
GO:0003677
GO:0046872
GO:0006355
GO:0006351
InterPro IPR003735
Pfam PF02583

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

Contributes to

GO:0046872

metal ion binding

PMID:18048925[1]

ECO:0000314

F

Figure 2: Shows csoR is copper sensitive in Bacillus Subtilis

complete

part_of

GO:0032993

protein-DNA complex

PMID:18048925[1]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

C

Seeded From UniProt

complete

part_of

GO:0032993

protein-DNA complex

PMID:18048925[1]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:18048925[1]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0001217

DNA-binding transcription repressor activity

PMID:18048925[1]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:18048925[1]

ECO:0005631

DNAse footprinting evidence used in manual assertion

RefSeq:NC_000964.3

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:18048925[1]

ECO:0001807

electrophoretic mobility shift assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0001217

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0001217

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003735

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003735

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003735

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Smaldone, GT & Helmann, JD (2007) CsoR regulates the copper efflux operon copZA in Bacillus subtilis. Microbiology (Reading, Engl.) 153 4123-8 PubMed GONUTS page