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ARATH:BRN2L
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | BRN2 (ECO:0000303 with PMID:23437850[1]) | |
| Protein Name(s) | RNA-binding protein BRN2 (ECO:0000305)
Protein BRUNO-LIKE 2 (ECO:0000303 with PMID:23437850[1]) AtBRN2 (ECO:0000303 with PMID:23437850[1]) | |
| External Links | ||
| UniProt | Q8GZ26 | |
| EMBL | AC002560 CP002684 AK117246 BT005358 | |
| PIR | B86166 T00912 | |
| RefSeq | NP_171845.2 | |
| UniGene | At.42544 | |
| ProteinModelPortal | Q8GZ26 | |
| SMR | Q8GZ26 | |
| IntAct | Q8GZ26 | |
| STRING | 3702.AT1G03457.2 | |
| PaxDb | Q8GZ26 | |
| PRIDE | Q8GZ26 | |
| EnsemblPlants | [example_ID AT1G03457.1] | |
| GeneID | 839497 | |
| KEGG | ath:AT1G03457 | |
| TAIR | AT1G03457 | |
| eggNOG | KOG0144 ENOG410XNTW | |
| HOGENOM | HOG000004754 | |
| KO | K13207 | |
| PhylomeDB | Q8GZ26 | |
| PRO | PR:Q8GZ26 | |
| Proteomes | UP000006548 | |
| ExpressionAtlas | Q8GZ26 | |
| Genevisible | Q8GZ26 | |
| GO | GO:0005737 GO:0030529 GO:0003729 GO:0000166 GO:0009908 GO:0006402 GO:0048573 GO:2000028 | |
| Gene3D | 3.30.70.330 | |
| InterPro | IPR002343 IPR012677 IPR000504 | |
| Pfam | PF00076 | |
| PRINTS | PR00961 | |
| SMART | SM00360 | |
| SUPFAM | SSF54928 | |
| PROSITE | PS50102 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0048573 |
photoperiodism, flowering |
ECO:0000315 |
P |
Figure 2 |
complete | |||||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:2000028 |
regulation of photoperiodism, flowering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006402 |
mRNA catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0048573 |
photoperiodism, flowering |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0265297 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0000114 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0000114 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1932407 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0000114 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009908 |
flower development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Kim, HS et al. (2013) Bruno-like proteins modulate flowering time via 3' UTR-dependent decay of SOC1 mRNA. New Phytol. 198 747-56 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
