AGRT5:Q8U5M8

Species (Taxon ID)	Agrobacterium tumefaciens (strain C58 / ATCC 33970). (176299)
Gene Name(s)	rpoN (ECO:0000313 with EMBL:AAK86149.1)
Protein Name(s)	RNA polymerase sigma-54 factor (ECO:0000256 with PIRNR:PIRNR000774)
External Links
UniProt	Q8U5M8
EMBL	AE007869
PIR	D97399
RefSeq	NP_353364.1
ProteinModelPortal	Q8U5M8
STRING	176299.Atu0332
EnsemblBacteria	AAK86149
GeneID	1132370
KEGG	atu:Atu0332
PATRIC	20810349
eggNOG	COG1508
HOGENOM	HOG000071904
KO	K03092
OMA	KVTRCIV
OrthoDB	EOG60CWN7
Proteomes	UP000000813
GO	GO:0003677 GO:0003899 GO:0003700 GO:0016987 GO:0006352
InterPro	IPR000394 IPR007046 IPR007634
Pfam	PF00309 PF04963 PF04552
PIRSF	PIRSF000774
PRINTS	PR00045
TIGRFAMs	TIGR02395
PROSITE	PS00717 PS00718 PS50044

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0001216	P		Seeded From UniProt	complete
	GO:0006355	regulation of transcription, DNA-dependent	PMID:1556090	ECO:0000315			P		Figure 2 shows that ntrA mutant strains of A. tumefaciens could not grow on minimal media with succinate, fumarate, or malate as the only carbon source or nitrate as the only nitrogen source. This shows that ntrA is involved in the use of poor nitrogen sources.	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
enables	GO:0001216	DNA-binding transcription activator activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000394	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR007046	F		Seeded From UniProt	complete
involved_in	GO:0006352	DNA-templated transcription, initiation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR007046	P		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000394	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0731	F		Seeded From UniProt	complete
enables	GO:0016740	transferase activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0808	F		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0731	P		Seeded From UniProt	complete
enables	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0240	F		Seeded From UniProt	complete
enables	GO:0016779	nucleotidyltransferase activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0548	F		Seeded From UniProt	complete
edit table

References

See Help:References for how to manage references in GONUTS.