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AGRFC:Q7CY45
Contents
| Species (Taxon ID) | Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacteriumtumefaciens (strain C58)). (176299) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | Bacteriophytochrome protein (ECO:0000313 with EMBL:AAK87748.2) | |
| External Links | ||
| UniProt | Q7CY45 | |
| EMBL | AE007869 | |
| RefSeq | NP_354963.2 WP_010971984.1 | |
| ProteinModelPortal | Q7CY45 | |
| STRING | 176299.Atu1990 | |
| EnsemblBacteria | AAK87748 | |
| GeneID | 1134028 | |
| KEGG | atu:Atu1990 | |
| PATRIC | 20813753 | |
| eggNOG | ENOG4105BZU ENOG410XNMH | |
| HOGENOM | HOG000030537 | |
| OrthoDB | EOG6G4VQG | |
| BioCyc | AGRO:ATU1990-MONOMER | |
| Proteomes | UP000000813 | |
| GO | GO:0005622 GO:0000155 GO:0004673 GO:0009883 GO:0009584 GO:0018106 GO:0019922 GO:0009585 GO:0006355 | |
| Gene3D | 1.10.287.130 3.30.450.40 3.30.565.10 | |
| InterPro | IPR003018 IPR029016 IPR003594 IPR005467 IPR003661 IPR000014 IPR013654 IPR016132 IPR001294 IPR013515 | |
| Pfam | PF01590 PF02518 PF00512 PF08446 PF00360 | |
| PRINTS | PR01033 | |
| SMART | SM00065 SM00387 SM00388 | |
| SUPFAM | SSF47384 SSF55781 SSF55785 SSF55874 | |
| PROSITE | PS50109 PS50046 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0000155 |
phosphorelay sensor kinase activity |
ECO:0000314 |
F |
Figure 1 displays that Agp1's phosphorylation activity is dependent on temperature. Figure 2 compares to another phytochrome Cph1 which has a different optimal temperature. |
complete | |||||
| GO:0046777 |
protein autophosphorylation |
ECO:0000314 |
P |
Figure 1 shows that the autophosphorylation of Agp1 is dependent on temperature. |
complete | |||||
| GO:0000155 |
phosphorelay sensor kinase activity |
ECO:0000304 |
F |
In the discussion section it is stated that histidine kinases act as temperature sensors, either as their sole function, or combined with sensing chemical factors as in VirA of Agrobacterium tumefaciens. |
complete | |||||
| GO:0004673 |
protein histidine kinase activity |
ECO:0000314 |
F |
Figure 1 shows that histidine kinase activity is dependent on temperature. |
complete | |||||
| GO:0009883 |
red or far-red light photoreceptor activity |
ECO:0000314 |
F |
Figure 1 shows that Agp1 that has been irradiated with FR light still has temperature dependency and only slightly lessened HK activity. |
complete | |||||
| GO:0009585 |
red, far-red light phototransduction |
ECO:0000314 |
P |
In Figure 1, the FR irradiated holoprotein version of Agp1 still confers HK activity albeit lessened than the "normal" version. Meaning the protein can utilize FR light. |
complete | |||||
|
involved_in |
GO:0019922 |
protein-chromophore linkage via peptidyl-cysteine |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0000155 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0018106 |
peptidyl-histidine phosphorylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004673 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0023014 |
signal transduction by protein phosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0000155 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000155 |
phosphorelay sensor kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007165 |
signal transduction |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009584 |
detection of visible light |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0018298 |
protein-chromophore linkage |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009883 |
red or far-red light photoreceptor activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009585 |
red, far-red light phototransduction |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004673 |
protein histidine kinase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Njimona, I et al. (2014) Temperature effects on bacterial phytochrome. PLoS ONE 9 e109794 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Lamparter, T et al. (2004) The biliverdin chromophore binds covalently to a conserved cysteine residue in the N-terminus of Agrobacterium phytochrome Agp1. Biochemistry 43 3659-69 PubMed GONUTS page
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