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2024-03-28T21:07:10Z
User contributions
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https://gowiki.tamu.edu/wiki/index.php?title=User:AMLINZ&diff=5010804
User:AMLINZ
2012-10-10T01:28:22Z
<p>AMLINZ: </p>
<hr />
<div><cacao><br />
group=Category:Team UW Fall2012<br />
session=Category:CACAO UW Fall 2012<br />
</cacao><br />
<br />
[[Category:Team UW Fall2012]]</div>
AMLINZ
https://gowiki.tamu.edu/wiki/index.php?title=AZOVI:NIFH1&diff=4997228
AZOVI:NIFH1
2012-09-29T16:19:28Z
<p>AMLINZ: Table edited by AMLINZ via TableEdit</p>
<hr />
<div><br />
<div style="float:right; margin: 1em;"> __TOC__</div><br />
<div id="infobox"><br />
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; background: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" align = 'center' width= '70%'<br />
|-<br />
|bgcolor='#CCCCFF'| '''Species (Taxon ID)''' || <i>Azotobacter vinelandii.</i> ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?lvl=0&id= ]) <br />
|-<br />
|bgcolor='#CCCCFF' |'''Gene Name(s)''' || nifH1 <br />
|-<br />
|bgcolor='#CCCCFF'| '''Protein Name(s)''' || Nitrogenase iron protein 1<br />
Nitrogenase Fe protein 1<br />
Nitrogenase component II<br />
Nitrogenase reductase<br />
|-<br />
| align="center" colspan="3" bgcolor="#dddddd" | '''External Links'''<br />
|-<br />
| bgcolor="#C3FDB8" | EMBL<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>M20568<br />M11579<br />X06886<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | PIR<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>A94666<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | PDB<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>1DE0<br />1FP6<br />1G1M<br />1G20<br />1G21<br />1G5P<br />1M1Y<br />1M34<br />1N2C<br />1NIP<br />1RW4<br />1XCP<br />1XD8<br />1XD9<br />1XDB<br />2AFH<br />2AFI<br />2AFK<br />2C8V<br />2NIP<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | PDBsum<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>1DE0<br />1FP6<br />1G1M<br />1G20<br />1G21<br />1G5P<br />1M1Y<br />1M34<br />1N2C<br />1NIP<br />1RW4<br />1XCP<br />1XD8<br />1XD9<br />1XDB<br />2AFH<br />2AFI<br />2AFK<br />2C8V<br />2NIP<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | ProteinModelPortal<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>P00459<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | SMR<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>P00459<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | BioCyc<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>MetaCyc:MONOMER-16519<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | GO<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>GO:0016612<br />GO:0051539<br />GO:0005524<br />GO:0018697<br />GO:0046872<br />GO:0016163<br />GO:0009399<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | HAMAP<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>MF_00533<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | InterPro<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>IPR000392<br />IPR005977<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | Pfam<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>PF00142<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | PIRSF<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>PIRSF000363<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | PRINTS<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>PR00091<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | TIGRFAMs<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>TIGR01287<br /></span><br />
|-<br />
| bgcolor="#C3FDB8" | PROSITE<br />
| bgcolor="#eeeeee" colspan="2" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>PS00746<br />PS00692<br />PS51026<br /></span><br />
<br />
|}<br />
</div><br />
<br />
==Annotations==<br />
<div id="annotations"><br />
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.772842.X4e9cc5ce16eb6--><br />
<!--<br />
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** <br />
* <br />
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{| id="X4e9cc5ce16eb6" class=" tableEdit Annotation_Headings dataTable" <br />
|- align='left' bgcolor='#CCCCFF'<br />
!|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status<br />
|- <br />
|<br />
<br />
|<br />
GO:0000166<br />
|<br />
nucleotide binding<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0547<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0005524<br />
|<br />
ATP binding<br />
|<br />
GO_REF:0000002<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
InterPro:IPR000392<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0005524<br />
|<br />
ATP binding<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0067<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0009399<br />
|<br />
nitrogen fixation<br />
|<br />
GO_REF:0000002<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
InterPro:IPR005977<br />
|<br />
P<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0009399<br />
|<br />
nitrogen fixation<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0535<br />
|<br />
P<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0016163<br />
|<br />
nitrogenase activity<br />
|<br />
GO_REF:0000002<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
InterPro:IPR005977<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0016163<br />
|<br />
nitrogenase activity<br />
|<br />
GO_REF:0000003<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
EC:1.18.6.1<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0016491<br />
|<br />
oxidoreductase activity<br />
|<br />
GO_REF:0000002<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
InterPro:IPR000392<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0016491<br />
|<br />
oxidoreductase activity<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0560<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0016612<br />
|<br />
molybdenum-iron nitrogenase complex<br />
|<br />
GO_REF:0000002<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
InterPro:IPR005977<br />
|<br />
C<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0018697<br />
|<br />
carbonyl sulfide nitrogenase activity<br />
|<br />
GO_REF:0000003<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
EC:1.18.6.1<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0046872<br />
|<br />
metal ion binding<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0479<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0051536<br />
|<br />
iron-sulfur cluster binding<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0411<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0051539<br />
|<br />
4 iron, 4 sulfur cluster binding<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0004<br />
|<br />
F<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0055114<br />
|<br />
oxidation-reduction process<br />
|<br />
GO_REF:0000002<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
InterPro:IPR000392<br />
|<br />
P<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0055114<br />
|<br />
oxidation-reduction process<br />
|<br />
GO_REF:0000002<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
InterPro:IPR005977<br />
|<br />
P<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0055114<br />
|<br />
oxidation-reduction process<br />
|<br />
GO_REF:0000004<br />
|<br />
IEA: Inferred from Electronic Annotation<br />
|<br />
SP_KW:KW-0560<br />
|<br />
P<br />
|<br />
Seeded From UniProt<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0016163<br />
|<br />
nitrogenase activity<br />
|<br />
PMID:3477546<br />
|<br />
IMP: Inferred from Mutant Phenotype<br />
|<br />
<br />
|<br />
F<br />
|<br />
Table 1<br />
|<br />
complete <br />
|- <br />
|<br />
<br />
|<br />
<br />
|<br />
<br />
|<br />
<br />
|<br />
<br />
|<br />
<br />
|<br />
<br />
|<br />
<br />
|<br />
<br />
|- <br />
|<br />
<br />
|<br />
GO:0016612<br />
|<br />
molybdenum-iron nitrogenase complex<br />
|<br />
PMID:22581696<br />
|<br />
IMP: Inferred from Mutant Phenotype<br />
|<br />
<br />
|<br />
C<br />
|<br />
Overexpression of nifH led to increased nitrogenase activity as measured by an acetylene assay - Figure 2.<br />
|<br />
complete <br />
<br />
|- class="tableEdit_footer" <br />
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.772842.X4e9cc5ce16eb6&page=772842&pagename={{FULLPAGENAMEE}}&type=0&template=Annotation_Headings edit table]</span> || || || || || || || ||<br />
|}<br />
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.772842.X4e9cc5ce16eb6--><br />
</div><br />
<br />
==Notes==<br />
<br />
<br />
==References==<br />
{{RefHelp}}<br />
<references/></div>
AMLINZ
https://gowiki.tamu.edu/wiki/index.php?title=User:AMLINZ&diff=4990321
User:AMLINZ
2012-09-25T14:48:43Z
<p>AMLINZ: Adding to category Category:Team UW Fall2012</p>
<hr />
<div><cacao><br />
group=Category:Team UW Fall2012<br />
session=Category:CACAO Fall 2012<br />
</cacao><br />
<br />
[[Category:Team UW Fall2012]]</div>
AMLINZ