GONUTS - User contributions [en]

Category:GO:1904067 ! ascr

2026-04-06T11:07:54Z

Wikientrybot: update GO:1904067_!_ascr#2_binding page

<protect>{{Autobox|1=<GOfig>GO:1904067</GOfig>'''id:''' GO:1904067 
'''name:''' ascr#2 binding 
'''namespace:''' [[:Category:GO:0003674_!_molecular_function|molecular_function]] 
'''def:''' "Binding to ascr#2." [GO_REF:0000067, GOC:kmv, GOC:TermGenie, PMID:22665789] 
'''is_a:''' [[:Category:GO:0097367 ! carbohydrate derivative binding|GO:0097367 ! carbohydrate derivative binding]] 
 

[[Category:GO:0097367 ! carbohydrate derivative binding]]
[[amigo-term:GO:1904067|AmiGO]]
<GOterm>GO:1904067</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:1904067 ! ascr

2026-04-06T11:07:51Z

Wikientrybot: GO:1904067_!_ascr renamed to GO:1904067_!_ascr#2_binding

#REDIRECT [[:Category:GO:1904067_!_ascr#2_binding]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:1904067 ! ascr

2026-03-30T11:09:35Z

Wikientrybot: GO:1904067_!_ascr renamed to GO:1904067_!_ascr#2_binding

#REDIRECT [[:Category:GO:1904067_!_ascr#2_binding]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:1904067 ! ascr

2026-03-30T11:09:35Z

Wikientrybot: update GO:1904067_!_ascr#2_binding page

Category:GO:0036242 ! obsolete glutamate catabolic process to succinate via 2-oxoglutarate-dependent GABA-transaminase activity

2026-03-30T11:08:23Z

Wikientrybot: update GO:0036242_!_obsolete_glutamate_catabolic_process_to_succinate_via_2-oxoglutarate-dependent_GABA-transaminase_activity page

<protect>{{Autobox|1=<GOfig>GO:0036242</GOfig>{{Warning|This GO term has been '''obsoleted'''. Do not annotate to it.}}
'''id:''' GO:0036242 
'''name:''' obsolete glutamate catabolic process to succinate via 2-oxoglutarate-dependent GABA-transaminase activity 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the 2-oxoglutarate-dependent gamma aminobutyrate (GABA) transaminase." [GOC:bf] 
'''comment:''' The reason for obsoletion is that this term was added in error (unnecessary specificity, these are steps in a single pathway) 
'''is_obsolete:''' true 
'''replaced_by:''' [[:Category:GO:0006540 ! GABA shunt|GO:0006540 ! GABA shunt]] 
 

[[Category:GO:Obsolete]]
[[amigo-term:GO:0036242|AmiGO]]
<GOterm>GO:0036242</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019549 ! obsolete glutamate catabolic process to succinate via succinate semialdehyde

2026-03-30T11:06:23Z

Wikientrybot: update GO:0019549_!_obsolete_glutamate_catabolic_process_to_succinate_via_succinate_semialdehyde page

<protect>{{Autobox|1=<GOfig>GO:0019549</GOfig>{{Warning|This GO term has been '''obsoleted'''. Do not annotate to it.}}
'''id:''' GO:0019549 
'''name:''' obsolete glutamate catabolic process to succinate via succinate semialdehyde 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the pyruvate-dependent gamma aminobutyrate (GABA) transaminase." [GOC:bf, GOC:curators, MetaCyc:PWY-4321] 
'''comment:''' The reason for obsoletion is that this term was added in error (unnecessary specificity, these are steps in a single pathway) 
'''is_obsolete:''' true 
'''replaced_by:''' [[:Category:GO:0006540 ! GABA shunt|GO:0006540 ! GABA shunt]] 
 

[[Category:GO:Obsolete]]
[[amigo-term:GO:0019549|AmiGO]]
<GOterm>GO:0019549</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0000014 ! single-stranded DNA endonuclease activity

2026-03-30T11:05:52Z

Wikientrybot: Add page for GO:0000014_!_single-stranded_DNA_endonuclease_activity

<protect>{{Autobox|1=<GOfig>GO:0000014</GOfig>'''id:''' GO:0000014 
'''name:''' single-stranded DNA endonuclease activity 
'''namespace:''' [[:Category:GO:0003674_!_molecular_function|molecular_function]] 
'''def:''' "Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks." [GOC:mah] 
'''synonym:''' "single-stranded DNA endodeoxyribonuclease activity" EXACT [] 
'''synonym:''' "single-stranded DNA specific endodeoxyribonuclease activity" RELATED [] 
'''synonym:''' "ssDNA-specific endodeoxyribonuclease activity" RELATED [GOC:mah] 
'''is_a:''' [[:Category:GO:0004520 ! DNA endonuclease activity|GO:0004520 ! DNA endonuclease activity]] 
'''is_a:''' [[:Category:GO:0016788 ! hydrolase activity, acting on ester bonds|GO:0016788 ! hydrolase activity, acting on ester bonds]] 
 

[[Category:GO:0004520 ! DNA endonuclease activity]][[Category:GO:0016788 ! hydrolase activity, acting on ester bonds]]
[[amigo-term:GO:0000014|AmiGO]]
<GOterm>GO:0000014</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0000014 ! single-stranded DNA endodeoxyribonuclease activity

2026-03-30T11:05:51Z

Wikientrybot: GO:0000014_!_single-stranded_DNA_endodeoxyribonuclease_activity renamed to GO:0000014_!_single-stranded_DNA_endonuclease_activity

#REDIRECT [[:Category:GO:0000014_!_single-stranded_DNA_endonuclease_activity]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0005590 ! collagen type VII trimer

2026-03-30T11:05:50Z

Wikientrybot: update GO:0005590_!_collagen_type_VII_trimer page

<protect>{{Autobox|1=<GOfig>GO:0005590</GOfig>'''id:''' GO:0005590 
'''name:''' collagen type VII trimer 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A collagen homotrimer of alpha1(VII) chains; type VII collagen triple helices form antiparallel dimer, which in turn associate laterally to form anchoring fibrils that connect type IV collagen in the basal lamina to plaques in the underlying connective tissue. It binds laminin." [PMID:19693541] 
'''is_a:''' [[:Category:GO:0140158 ! von-Willerbrand-factor-A-domain-rich collagen trimer|GO:0140158 ! von-Willerbrand-factor-A-domain-rich collagen trimer]] 
'''is_a:''' [[:Category:GO:0140392 ! extracellular protein-containing complex|GO:0140392 ! extracellular protein-containing complex]] 
'''relationship:''' part_of: [[:Category:GO:0098648 ! collagen anchoring fibril|GO:0098648 ! collagen anchoring fibril]] 
 

[[Category:GO:0140158 ! von-Willerbrand-factor-A-domain-rich collagen trimer]][[Category:GO:0140392 ! extracellular protein-containing complex]][[Category:GO:0098648 ! collagen anchoring fibril]]
[[amigo-term:GO:0005590|AmiGO]]
<GOterm>GO:0005590</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0005583 ! fibrillar collagen trimer

2026-03-30T11:05:50Z

Wikientrybot: update GO:0005583_!_fibrillar_collagen_trimer page

<protect>{{Autobox|1=<GOfig>GO:0005583</GOfig>'''id:''' GO:0005583 
'''name:''' fibrillar collagen trimer 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "Any triple helical collagen trimer that forms fibrils." [PMID:21421911] 
'''is_a:''' [[:Category:GO:0005581 ! collagen trimer|GO:0005581 ! collagen trimer]] 
'''is_a:''' [[:Category:GO:0140392 ! extracellular protein-containing complex|GO:0140392 ! extracellular protein-containing complex]] 
'''relationship:''' part_of: [[:Category:GO:0098643 ! fibrillar collagen complex|GO:0098643 ! fibrillar collagen complex]] 
'''disjoint_from:''' [[:Category:GO:0030936 ! transmembrane collagen trimer|GO:0030936 ! transmembrane collagen trimer]] 
'''intersection_of:''' [[:Category:GO:0005581 ! collagen trimer|GO:0005581 ! collagen trimer]] 
'''intersection_of:''' part_of [[:Category: GO:0098643 ! fibrillar collagen complex| GO:0098643 ! fibrillar collagen complex]] 
 

[[Category:GO:0005581 ! collagen trimer]][[Category:GO:0140392 ! extracellular protein-containing complex]][[Category:GO:0098643 ! fibrillar collagen complex]]
[[amigo-term:GO:0005583|AmiGO]]
<GOterm>GO:0005583</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0005589 ! collagen type VI trimer

2026-03-30T11:05:50Z

Wikientrybot: update GO:0005589_!_collagen_type_VI_trimer page

<protect>{{Autobox|1=<GOfig>GO:0005589</GOfig>'''id:''' GO:0005589 
'''name:''' collagen type VI trimer 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A collagen heterotrimer containing type VI alpha chains in alpha1(VI)alpha2(VI)alpha3(VI) trimers; type VI collagen triple helices associate to form beaded fibrils." [PMID:19693541, PMID:21421911] 
'''is_a:''' [[:Category:GO:0140158 ! von-Willerbrand-factor-A-domain-rich collagen trimer|GO:0140158 ! von-Willerbrand-factor-A-domain-rich collagen trimer]] 
'''is_a:''' [[:Category:GO:0140392 ! extracellular protein-containing complex|GO:0140392 ! extracellular protein-containing complex]] 
'''relationship:''' part_of: [[:Category:GO:0098647 ! collagen beaded filament|GO:0098647 ! collagen beaded filament]] 
 

[[Category:GO:0140158 ! von-Willerbrand-factor-A-domain-rich collagen trimer]][[Category:GO:0140392 ! extracellular protein-containing complex]][[Category:GO:0098647 ! collagen beaded filament]]
[[amigo-term:GO:0005589|AmiGO]]
<GOterm>GO:0005589</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0005593 ! FACIT collagen trimer

2026-03-30T11:05:49Z

Wikientrybot: update GO:0005593_!_FACIT_collagen_trimer page

<protect>{{Autobox|1=<GOfig>GO:0005593</GOfig>'''id:''' GO:0005593 
'''name:''' FACIT collagen trimer 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A collagen trimer that associates with collagen fibrils and consists of collagen monomers that contain two or more relatively short triple-helical domains connected by non-triple-helical sequences." [PMID:21421911] 
'''comment:''' The acronym FACIT stands for fibril-associated collagen with interrupted triple helix. 
'''xref:''' [http://en.wikipedia.org/wiki/FACIT_collagen Wikipedia:FACIT_collagen] 
'''is_a:''' [[:Category:GO:0005581 ! collagen trimer|GO:0005581 ! collagen trimer]] 
'''is_a:''' [[:Category:GO:0140392 ! extracellular protein-containing complex|GO:0140392 ! extracellular protein-containing complex]] 
'''relationship:''' part_of: [[:Category:GO:0140153 ! FACIT collagen complex|GO:0140153 ! FACIT collagen complex]] 
 

[[Category:GO:0005581 ! collagen trimer]][[Category:GO:0140392 ! extracellular protein-containing complex]][[Category:GO:0140153 ! FACIT collagen complex]]
[[amigo-term:GO:0005593|AmiGO]]
<GOterm>GO:0005593</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0005619 ! ascospore wall

2026-03-30T11:05:49Z

Wikientrybot: update GO:0005619_!_ascospore_wall page

<protect>{{Autobox|1=<GOfig>GO:0005619</GOfig>'''id:''' GO:0005619 
'''name:''' ascospore wall 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "The specialized cell wall of the ascospore (spore), which is the product of meiotic division. Examples of this component are found in Fungi." [GOC:vw, PMID:36266346] 
'''synonym:''' "fungal-type spore wall" BROAD [GOC:mah] 
'''is_a:''' [[:Category:GO:0009277 ! fungal-type cell wall|GO:0009277 ! fungal-type cell wall]] 
'''is_a:''' [[:Category:GO:0031160 ! spore wall|GO:0031160 ! spore wall]] 
 

[[Category:GO:0009277 ! fungal-type cell wall]][[Category:GO:0031160 ! spore wall]]
[[amigo-term:GO:0005619|AmiGO]]
<GOterm>GO:0005619</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0006032 ! chitin catabolic process

2026-03-30T11:05:48Z

Wikientrybot: update GO:0006032_!_chitin_catabolic_process page

<protect>{{Autobox|1=<GOfig>GO:0006032</GOfig>'''id:''' GO:0006032 
'''name:''' chitin catabolic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues." [GOC:jl, ISBN:0198506732] 
'''synonym:''' "beta-1,4-linked N-acetylglucosamine catabolic process" EXACT [] 
'''synonym:''' "beta-1,4-linked N-acetylglucosamine catabolism" EXACT [] 
'''synonym:''' "chitin breakdown" EXACT [] 
'''synonym:''' "chitin catabolism" EXACT [] 
'''synonym:''' "chitin degradation" EXACT [] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-6855 MetaCyc:PWY-6855] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-6902 MetaCyc:PWY-6902] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-7118 MetaCyc:PWY-7118] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-7822 MetaCyc:PWY-7822] 
'''is_a:''' [[:Category:GO:0006026 ! aminoglycan catabolic process|GO:0006026 ! aminoglycan catabolic process]] 
'''is_a:''' [[:Category:GO:0006030 ! chitin metabolic process|GO:0006030 ! chitin metabolic process]] 
'''is_a:''' [[:Category:GO:1901072 ! glucosamine-containing compound catabolic process|GO:1901072 ! glucosamine-containing compound catabolic process]] 
 

[[Category:GO:0006026 ! aminoglycan catabolic process]][[Category:GO:0006030 ! chitin metabolic process]][[Category:GO:1901072 ! glucosamine-containing compound catabolic process]]
[[amigo-term:GO:0006032|AmiGO]]
<GOterm>GO:0006032</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
==Usage Notes==

==References==
{{RefHelp}}
<references/>

Category:GO:0006085 ! acetyl-CoA biosynthetic process

2026-03-30T11:05:47Z

Wikientrybot: update GO:0006085_!_acetyl-CoA_biosynthetic_process page

<protect>{{Autobox|1=<GOfig>GO:0006085</GOfig>'''id:''' GO:0006085 
'''name:''' acetyl-CoA biosynthetic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated." [GOC:curators] 
'''synonym:''' "acetyl-CoA anabolism" EXACT [] 
'''synonym:''' "acetyl-CoA biosynthesis" EXACT [] 
'''synonym:''' "acetyl-CoA formation" EXACT [] 
'''synonym:''' "acetyl-CoA synthesis" EXACT [] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=ACETATEUTIL-PWY MetaCyc:ACETATEUTIL-PWY] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=Acetyl-CoA-Biosynthesis MetaCyc:Acetyl-CoA-Biosynthesis] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=ETOH-ACETYLCOA-ANA-PWY MetaCyc:ETOH-ACETYLCOA-ANA-PWY] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-5172 MetaCyc:PWY-5172] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY66-161 MetaCyc:PWY66-161] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY66-162 MetaCyc:PWY66-162] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY66-21 MetaCyc:PWY66-21] 
'''is_a:''' [[:Category:GO:0006084 ! acetyl-CoA metabolic process|GO:0006084 ! acetyl-CoA metabolic process]] 
'''is_a:''' [[:Category:GO:0071616 ! acyl-CoA biosynthetic process|GO:0071616 ! acyl-CoA biosynthetic process]] 
 

[[Category:GO:0006084 ! acetyl-CoA metabolic process]][[Category:GO:0071616 ! acyl-CoA biosynthetic process]]
[[amigo-term:GO:0006085|AmiGO]]
<GOterm>GO:0006085</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
==Usage Notes==

==References==
{{RefHelp}}
<references/>

Category:GO:0006506 ! GPI anchor biosynthetic process

2026-03-30T11:05:46Z

Wikientrybot: update GO:0006506_!_GPI_anchor_biosynthetic_process page

<protect>{{Autobox|1=<GOfig>GO:0006506</GOfig>'''id:''' GO:0006506 
'''name:''' GPI anchor biosynthetic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''alt_id:''' GO:0015998 
'''def:''' "The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage." [GOC:curators, ISBN:0198547684] 
'''synonym:''' "glycosylphosphatidylinositol biosynthesis" EXACT [] 
'''synonym:''' "glycosylphosphatidylinositol biosynthetic process" EXACT [] 
'''synonym:''' "GPI anchor anabolism" EXACT [] 
'''synonym:''' "GPI anchor biosynthesis" EXACT [] 
'''synonym:''' "GPI anchor formation" EXACT [] 
'''synonym:''' "GPI anchor synthesis" EXACT [] 
'''synonym:''' "GPI/GSI anchor biosynthesis" BROAD [] 
'''synonym:''' "GPI/GSI anchor biosynthetic process" BROAD [] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-8600 MetaCyc:PWY-8600] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-8601 MetaCyc:PWY-8601] 
'''is_a:''' [[:Category:GO:0006505 ! GPI anchor metabolic process|GO:0006505 ! GPI anchor metabolic process]] 
'''is_a:''' [[:Category:GO:0009247 ! glycolipid biosynthetic process|GO:0009247 ! glycolipid biosynthetic process]] 
'''is_a:''' [[:Category:GO:0046474 ! glycerophospholipid biosynthetic process|GO:0046474 ! glycerophospholipid biosynthetic process]] 
'''relationship:''' part_of: [[:Category:GO:0180046 ! GPI anchored protein biosynthesis|GO:0180046 ! GPI anchored protein biosynthesis]] 
 

[[Category:GO:0006505 ! GPI anchor metabolic process]][[Category:GO:0009247 ! glycolipid biosynthetic process]][[Category:GO:0046474 ! glycerophospholipid biosynthetic process]][[Category:GO:0180046 ! GPI anchored protein biosynthesis]]
[[amigo-term:GO:0006506|AmiGO]]
<GOterm>GO:0006506</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
==Usage Notes==

==References==
{{RefHelp}}
<references/>

Category:GO:0006540 ! GABA shunt

2026-03-30T11:05:45Z

Wikientrybot: Add page for GO:0006540_!_GABA_shunt

<protect>{{Autobox|1=<GOfig>GO:0006540</GOfig>'''id:''' GO:0006540 
'''name:''' GABA shunt 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the formation of succinate from L-glutamate via gamma-aminobutyrate (GABA), bypassing two steps of the TCA cycle. It operates through the sequential conversion of glutamate to GABA by glutamate decarboxylase, transamination of GABA to succinic semialdehyde by GABA transaminase, and oxidation of succinic semialdehyde to succinate by succinate semialdehyde dehydrogenase." [PMID:39703920] 
'''synonym:''' "4-aminobutyrate shunt" EXACT [] 
'''synonym:''' "gamma aminobutyrate shunt" EXACT [] 
'''synonym:''' "gamma-aminobutyrate shunt" EXACT [] 
'''synonym:''' "glutamate decarboxylation to succinate" EXACT [] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=GLUDEG-I-PWY MetaCyc:GLUDEG-I-PWY] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-8346 MetaCyc:PWY-8346] 
'''is_a:''' [[:Category:GO:0006105 ! succinate metabolic process|GO:0006105 ! succinate metabolic process]] 
'''is_a:''' [[:Category:GO:0006536 ! glutamate metabolic process|GO:0006536 ! glutamate metabolic process]] 
'''is_a:''' [[:Category:GO:0170033 ! L-amino acid metabolic process|GO:0170033 ! L-amino acid metabolic process]] 
'''is_a:''' [[:Category:GO:0170039 ! proteinogenic amino acid metabolic process|GO:0170039 ! proteinogenic amino acid metabolic process]] 
 

[[Category:GO:0006105 ! succinate metabolic process]][[Category:GO:0006536 ! glutamate metabolic process]][[Category:GO:0170033 ! L-amino acid metabolic process]][[Category:GO:0170039 ! proteinogenic amino acid metabolic process]]
[[amigo-term:GO:0006540|AmiGO]]
<GOterm>GO:0006540</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0006540 ! gamma-aminobutyrate shunt

2026-03-30T11:05:41Z

Wikientrybot: GO:0006540_!_gamma-aminobutyrate_shunt renamed to GO:0006540_!_GABA_shunt

#REDIRECT [[:Category:GO:0006540_!_GABA_shunt]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0006587 ! serotonin biosynthetic process from L-tryptophan

2026-03-30T11:05:41Z

Wikientrybot: update GO:0006587_!_serotonin_biosynthetic_process_from_L-tryptophan page

<protect>{{Autobox|1=<GOfig>GO:0006587</GOfig>'''id:''' GO:0006587 
'''name:''' serotonin biosynthetic process from L-tryptophan 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the formation from L-tryptophan of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties." [GOC:jl, ISBN:0198506732, PMID:30901029, PMID:35495641] 
'''synonym:''' "serotonin anabolism from tryptophan" EXACT [] 
'''synonym:''' "serotonin formation from tryptophan" EXACT [] 
'''synonym:''' "serotonin synthesis from tryptophan" EXACT [] 
'''is_a:''' [[:Category:GO:0006568 ! L-tryptophan metabolic process|GO:0006568 ! L-tryptophan metabolic process]] 
'''is_a:''' [[:Category:GO:0042427 ! serotonin biosynthetic process|GO:0042427 ! serotonin biosynthetic process]] 
 

[[Category:GO:0006568 ! L-tryptophan metabolic process]][[Category:GO:0042427 ! serotonin biosynthetic process]]
[[amigo-term:GO:0006587|AmiGO]]
<GOterm>GO:0006587</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009277 ! fungal-type cell wall

2026-03-30T11:05:40Z

Wikientrybot: update GO:0009277_!_fungal-type_cell_wall page

<protect>{{Autobox|1=<GOfig>GO:0009277</GOfig>'''id:''' GO:0009277 
'''name:''' fungal-type cell wall 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A rigid yet dynamic structure surrounding the plasma membrane that affords protection from stresses and contributes to cell morphogenesis, consisting of extensively cross-linked glycoproteins and carbohydrates. The glycoproteins may be modified with N- or O-linked carbohydrates, or glycosylphosphatidylinositol (GPI) anchors; the polysaccharides are primarily branched glucans, including beta-linked and alpha-linked glucans, and may also include chitin and other carbohydrate polymers, but not cellulose or pectin. Enzymes involved in cell wall biosynthesis are also found in the cell wall. Note that some forms of fungi develop a capsule outside of the cell wall under certain circumstances; this is considered a separate structure." [GOC:mcc, GOC:mtg_sensu, ISBN:3540601864, PMID:11283274, PMID:16927300, PMID:3319422, PMID:36266346] 
'''synonym:''' "beta-glucan-containing cell wall" RELATED [] 
'''synonym:''' "chitin- and beta-glucan-containing cell wall" NARROW [] 
'''synonym:''' "chitin-containing cell wall" RELATED [] 
'''is_a:''' [[:Category:GO:0005618 ! cell wall|GO:0005618 ! cell wall]] 
 

[[Category:GO:0005618 ! cell wall]]
[[amigo-term:GO:0009277|AmiGO]]
<GOterm>GO:0009277</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
==Usage Notes==

==References==
{{RefHelp}}
<references/>

Category:GO:0009448 ! gamma-aminobutyric acid metabolic process

2026-03-30T11:05:39Z

Wikientrybot: GO:0009448_!_gamma-aminobutyric_acid_metabolic_process renamed to GO:0009448_!_GABA_metabolic_process

#REDIRECT [[:Category:GO:0009448_!_GABA_metabolic_process]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009279 ! cell outer membrane

2026-03-30T11:05:39Z

Wikientrybot: update GO:0009279_!_cell_outer_membrane page

<protect>{{Autobox|1=<GOfig>GO:0009279</GOfig>'''id:''' GO:0009279 
'''name:''' cell outer membrane 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures." [GOC:md, GOC:mtg_sensu, ISBN:0135712254] 
'''comment:''' To annotate the plasma (cytoplasmic) membrane, see instead GO:0005886. 
'''subset:''' [[:Category:GO:goslim_prokaryote|goslim_prokaryote]] 
'''subset:''' [[:Category:GO:goslim_prokaryote_ribbon|goslim_prokaryote_ribbon]] 
'''synonym:''' "outer membrane of cell" EXACT [] 
'''is_a:''' [[:Category:GO:0019867 ! outer membrane|GO:0019867 ! outer membrane]] 
'''is_a:''' [[:Category:GO:0030312 ! external encapsulating structure|GO:0030312 ! external encapsulating structure]] 
'''relationship:''' part_of: [[:Category:GO:0030313 ! cell envelope|GO:0030313 ! cell envelope]] 
'''intersection_of:''' [[:Category:GO:0019867 ! outer membrane|GO:0019867 ! outer membrane]] 
'''intersection_of:''' part_of [[:Category: GO:0030313 ! cell envelope| GO:0030313 ! cell envelope]] 
 

[[Category:GO:goslim_prokaryote]][[Category:GO:goslim_prokaryote_ribbon]][[Category:GO:0019867 ! outer membrane]][[Category:GO:0030312 ! external encapsulating structure]][[Category:GO:0030313 ! cell envelope]]
[[amigo-term:GO:0009279|AmiGO]]
<GOterm>GO:0009279</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
==Usage Notes==

==References==
{{RefHelp}}
<references/>

Category:GO:0009448 ! GABA metabolic process

2026-03-30T11:05:39Z

Wikientrybot: Add page for GO:0009448_!_GABA_metabolic_process

<protect>{{Autobox|1=<GOfig>GO:0009448</GOfig>'''id:''' GO:0009448 
'''name:''' GABA metabolic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms." [ISBN:0198506732] 
'''comment:''' See also the biological process term 'neurotransmitter metabolic process ; GO:0042133'. 
'''synonym:''' "4-aminobutanoate metabolic process" EXACT [] 
'''synonym:''' "4-aminobutanoate metabolism" EXACT [] 
'''synonym:''' "4-aminobutyrate metabolic process" EXACT [] 
'''synonym:''' "4-aminobutyrate metabolism" EXACT [] 
'''synonym:''' "GABA metabolism" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid metabolic process" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid metabolism" EXACT [] 
'''is_a:''' [[:Category:GO:0032787 ! monocarboxylic acid metabolic process|GO:0032787 ! monocarboxylic acid metabolic process]] 
'''is_a:''' [[:Category:GO:0170041 ! non-proteinogenic amino acid metabolic process|GO:0170041 ! non-proteinogenic amino acid metabolic process]] 
 

[[Category:GO:0032787 ! monocarboxylic acid metabolic process]][[Category:GO:0170041 ! non-proteinogenic amino acid metabolic process]]
[[amigo-term:GO:0009448|AmiGO]]
<GOterm>GO:0009448</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009449 ! gamma-aminobutyric acid biosynthetic process

2026-03-30T11:05:38Z

Wikientrybot: GO:0009449_!_gamma-aminobutyric_acid_biosynthetic_process renamed to GO:0009449_!_GABA_biosynthetic_process

#REDIRECT [[:Category:GO:0009449_!_GABA_biosynthetic_process]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009450 ! GABA catabolic process

2026-03-30T11:05:38Z

Wikientrybot: Add page for GO:0009450_!_GABA_catabolic_process

<protect>{{Autobox|1=<GOfig>GO:0009450</GOfig>'''id:''' GO:0009450 
'''name:''' GABA catabolic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA)." [GOC:curators] 
'''comment:''' See also the biological process term 'neurotransmitter catabolic process ; GO:0042135' and 'GABA shunt ; GO:0006540'. 
'''synonym:''' "4-aminobutanoate catabolic process" EXACT [] 
'''synonym:''' "4-aminobutanoate catabolism" EXACT [] 
'''synonym:''' "4-aminobutyrate catabolic process" EXACT [] 
'''synonym:''' "4-aminobutyrate catabolism" EXACT [] 
'''synonym:''' "GABA catabolism" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid breakdown" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid catabolic process" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid catabolism" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid degradation" EXACT [] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-5022 MetaCyc:PWY-5022] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-6473 MetaCyc:PWY-6473] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-6535 MetaCyc:PWY-6535] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-6536 MetaCyc:PWY-6536] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-6537 MetaCyc:PWY-6537] 
'''is_a:''' [[:Category:GO:0009063 ! amino acid catabolic process|GO:0009063 ! amino acid catabolic process]] 
'''is_a:''' [[:Category:GO:0009448 ! GABA metabolic process|GO:0009448 ! GABA metabolic process]] 
'''is_a:''' [[:Category:GO:0170044 ! non-proteinogenic amino acid catabolic process|GO:0170044 ! non-proteinogenic amino acid catabolic process]] 
 

[[Category:GO:0009063 ! amino acid catabolic process]][[Category:GO:0009448 ! GABA metabolic process]][[Category:GO:0170044 ! non-proteinogenic amino acid catabolic process]]
[[amigo-term:GO:0009450|AmiGO]]
<GOterm>GO:0009450</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009449 ! GABA biosynthetic process

2026-03-30T11:05:38Z

Wikientrybot: Add page for GO:0009449_!_GABA_biosynthetic_process

<protect>{{Autobox|1=<GOfig>GO:0009449</GOfig>'''id:''' GO:0009449 
'''name:''' GABA biosynthetic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the formation of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms." [GOC:ai] 
'''comment:''' See also the biological process term 'neurotransmitter biosynthetic process ; GO:0042136' and 'GABA shunt ; GO:0006540'. 
'''synonym:''' "4-aminobutanoate biosynthesis" EXACT [] 
'''synonym:''' "4-aminobutanoate biosynthetic process" EXACT [] 
'''synonym:''' "4-aminobutyrate biosynthesis" EXACT [] 
'''synonym:''' "4-aminobutyrate biosynthetic process" EXACT [] 
'''synonym:''' "GABA biosynthesis" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid anabolism" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid biosynthesis" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid biosynthetic process" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid formation" EXACT [] 
'''synonym:''' "gamma-aminobutyric acid synthesis" EXACT [] 
'''is_a:''' [[:Category:GO:0008652 ! amino acid biosynthetic process|GO:0008652 ! amino acid biosynthetic process]] 
'''is_a:''' [[:Category:GO:0009448 ! GABA metabolic process|GO:0009448 ! GABA metabolic process]] 
'''is_a:''' [[:Category:GO:0170043 ! non-proteinogenic amino acid biosynthetic process|GO:0170043 ! non-proteinogenic amino acid biosynthetic process]] 
 

[[Category:GO:0008652 ! amino acid biosynthetic process]][[Category:GO:0009448 ! GABA metabolic process]][[Category:GO:0170043 ! non-proteinogenic amino acid biosynthetic process]]
[[amigo-term:GO:0009449|AmiGO]]
<GOterm>GO:0009449</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009450 ! gamma-aminobutyric acid catabolic process

2026-03-30T11:05:37Z

Wikientrybot: GO:0009450_!_gamma-aminobutyric_acid_catabolic_process renamed to GO:0009450_!_GABA_catabolic_process

#REDIRECT [[:Category:GO:0009450_!_GABA_catabolic_process]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009505 ! plant-type cell wall

2026-03-30T11:05:36Z

Wikientrybot: update GO:0009505_!_plant-type_cell_wall page

<protect>{{Autobox|1=<GOfig>GO:0009505</GOfig>'''id:''' GO:0009505 
'''name:''' plant-type cell wall 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A more or less rigid structure lying outside the cell membrane of a cell and composed of cellulose and pectin and other organic and inorganic substances." [ISBN:0471245208, PMID:39878232] 
'''synonym:''' "cellulose and pectin-containing cell wall" EXACT [] 
'''synonym:''' "plant cell wall" NARROW [] 
'''is_a:''' [[:Category:GO:0005618 ! cell wall|GO:0005618 ! cell wall]] 
 

[[Category:GO:0005618 ! cell wall]]
[[amigo-term:GO:0009505|AmiGO]]
<GOterm>GO:0009505</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009531 ! secondary cell wall

2026-03-30T11:05:36Z

Wikientrybot: update GO:0009531_!_secondary_cell_wall page

<protect>{{Autobox|1=<GOfig>GO:0009531</GOfig>'''id:''' GO:0009531 
'''name:''' secondary cell wall 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A plant cell wall that is no longer able to expand and so does not permit growth. Secondary cell walls contain less pectin that primary cell walls. The secondary cell is mostly composed of cellulose and is strengthened with lignin." [GOC:jid, ISBN:0943088399, PMID:39878232] 
'''xref:''' [http://en.wikipedia.org/wiki/Secondary_cell_wall Wikipedia:Secondary_cell_wall] 
'''is_a:''' [[:Category:GO:0009505 ! plant-type cell wall|GO:0009505 ! plant-type cell wall]] 
 

[[Category:GO:0009505 ! plant-type cell wall]]
[[amigo-term:GO:0009531|AmiGO]]
<GOterm>GO:0009531</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0009530 ! primary cell wall

2026-03-30T11:05:36Z

Wikientrybot: update GO:0009530_!_primary_cell_wall page

<protect>{{Autobox|1=<GOfig>GO:0009530</GOfig>'''id:''' GO:0009530 
'''name:''' primary cell wall 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A plant cell wall that is still able to expand, permitting cell growth. Primary cell walls contain more pectin than secondary walls and no lignin is present." [GOC:jid, PMID:39878232, PMID:9442872] 
'''is_a:''' [[:Category:GO:0009505 ! plant-type cell wall|GO:0009505 ! plant-type cell wall]] 
 

[[Category:GO:0009505 ! plant-type cell wall]]
[[amigo-term:GO:0009530|AmiGO]]
<GOterm>GO:0009530</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0010367 ! extracellular isoamylase complex

2026-03-30T11:05:34Z

Wikientrybot: update GO:0010367_!_extracellular_isoamylase_complex page

<protect>{{Autobox|1=<GOfig>GO:0010367</GOfig>'''id:''' GO:0010367 
'''name:''' extracellular isoamylase complex 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in animals are localized in the extracellular space." [GOC:tair_curators] 
'''is_a:''' [[:Category:GO:0140392 ! extracellular protein-containing complex|GO:0140392 ! extracellular protein-containing complex]] 
 

[[Category:GO:0140392 ! extracellular protein-containing complex]]
[[amigo-term:GO:0010367|AmiGO]]
<GOterm>GO:0010367</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
==Usage Notes==

==References==
{{RefHelp}}
<references/>

Category:GO:0016428 ! tRNA (cytidine-N5)-methyltransferase activity

2026-03-30T11:05:34Z

Wikientrybot: update GO:0016428_!_tRNA_(cytidine-N5)-methyltransferase_activity page

<protect>{{Autobox|1=<GOfig>GO:0016428</GOfig>'''id:''' GO:0016428 
'''name:''' tRNA (cytidine-N5)-methyltransferase activity 
'''namespace:''' [[:Category:GO:0003674_!_molecular_function|molecular_function]] 
'''def:''' "Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = a 5-methylcytidine in tRNA + S-adenosyl-L-homocysteine + H+. This modification can occur on several residues, including cytidine(34), cytidine(40), cytidine(48), and cytidine(49)." [RHEA:61468] 
'''synonym:''' "S-adenosyl-L-methionine:tRNA (cytosine-5-)-methyltransferase activity" RELATED [] 
'''synonym:''' "transfer ribonucleate cytosine 5-methyltransferase activity" RELATED [] 
'''synonym:''' "transfer RNA cytosine 5-methyltransferase activity" RELATED [] 
'''synonym:''' "tRNA (cytidine-5-)-methyltransferase activity" EXACT [] 
'''synonym:''' "tRNA (cytosine-5-)-methyltransferase activity" EXACT [] 
'''xref:''' [https://enzyme.expasy.org/EC/2.1.1.202 EC:2.1.1.202] 
'''xref:''' [https://www.rhea-db.org/rhea/42940 RHEA:42940] 
'''xref:''' [https://www.rhea-db.org/rhea/42944 RHEA:42944] 
'''xref:''' [https://www.rhea-db.org/rhea/42948 RHEA:42948] 
'''xref:''' [https://www.rhea-db.org/rhea/42952 RHEA:42952] 
'''xref:''' [https://www.rhea-db.org/rhea/42956 RHEA:42956] 
'''xref:''' [https://www.rhea-db.org/rhea/51160 RHEA:51160] 
'''xref:''' [https://www.rhea-db.org/rhea/51164 RHEA:51164] 
'''xref:''' [https://www.rhea-db.org/rhea/51172 RHEA:51172] 
'''xref:''' [https://www.rhea-db.org/rhea/51180 RHEA:51180] 
'''xref:''' [https://www.rhea-db.org/rhea/53076 RHEA:53076] 
'''xref:''' [https://www.rhea-db.org/rhea/54136 RHEA:54136] 
'''xref:''' [https://www.rhea-db.org/rhea/54140 RHEA:54140] 
'''xref:''' [https://www.rhea-db.org/rhea/61468 RHEA:61468] 
'''xref:''' [https://www.rhea-db.org/rhea/61488 RHEA:61488] 
'''xref:''' [https://www.rhea-db.org/rhea/61988 RHEA:61988] 
'''is_a:''' [[:Category:GO:0016427 ! tRNA (cytidine) methyltransferase activity|GO:0016427 ! tRNA (cytidine) methyltransferase activity]] 
 

[[Category:GO:0016427 ! tRNA (cytidine) methyltransferase activity]]
[[amigo-term:GO:0016428|AmiGO]]
<GOterm>GO:0016428</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0018756 ! ammeline aminohydrolase activity

2026-03-30T11:05:33Z

Wikientrybot: update GO:0018756_!_ammeline_aminohydrolase_activity page

<protect>{{Autobox|1=<GOfig>GO:0018756</GOfig>'''id:''' GO:0018756 
'''name:''' ammeline aminohydrolase activity 
'''namespace:''' [[:Category:GO:0003674_!_molecular_function|molecular_function]] 
'''def:''' "Catalysis of the reaction: ammeline + H2O = ammelide + NH4+. Also converts melamine to ammeline." [EC:3.5.4.45, PMID:1991731] 
'''xref:''' [https://enzyme.expasy.org/EC/3.5.4.45 EC:3.5.4.45] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=RXN-8016 MetaCyc:RXN-8016] 
'''xref:''' [https://www.rhea-db.org/rhea/26197 RHEA:26197] 
'''xref:''' [https://www.rhea-db.org/rhea/26201 RHEA:26201] 
'''is_a:''' [[:Category:GO:0016813 ! hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines|GO:0016813 ! hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines]] 
 

[[Category:GO:0016813 ! hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines]]
[[amigo-term:GO:0018756|AmiGO]]
<GOterm>GO:0018756</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0016849 ! phosphorus-oxygen lyase activity

2026-03-30T11:05:33Z

Wikientrybot: update GO:0016849_!_phosphorus-oxygen_lyase_activity page

<protect>{{Autobox|1=<GOfig>GO:0016849</GOfig>'''id:''' GO:0016849 
'''name:''' phosphorus-oxygen lyase activity 
'''namespace:''' [[:Category:GO:0003674_!_molecular_function|molecular_function]] 
'''def:''' "Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond." [GOC:jl] 
'''xref:''' [https://enzyme.expasy.org/EC/4.6.1.- EC:4.6.1.-] 
'''is_a:''' [[:Category:GO:0016829 ! lyase activity|GO:0016829 ! lyase activity]] 
 

[[Category:GO:0016829 ! lyase activity]]
[[amigo-term:GO:0016849|AmiGO]]
<GOterm>GO:0016849</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019335 ! methylquinoline catabolic process

2026-03-30T11:05:32Z

Wikientrybot: update GO:0019335_!_methylquinoline_catabolic_process page

<protect>{{Autobox|1=<GOfig>GO:0019335</GOfig>'''id:''' GO:0019335 
'''name:''' methylquinoline catabolic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the breakdown of methylquinoline, an aromatic compound composed of a benzene ring and a heterocyclic N-containing ring." [GOC:ai, PMID:10746195] 
'''synonym:''' "2-methylquinoline catabolic process" NARROW [] 
'''synonym:''' "3-methylquinoline breakdown" NARROW [] 
'''synonym:''' "3-methylquinoline catabolic process" NARROW [] 
'''synonym:''' "3-methylquinoline catabolism" NARROW [] 
'''synonym:''' "3-methylquinoline degradation" NARROW [] 
'''synonym:''' "quinaldine catabolic process" NARROW [] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-721 MetaCyc:PWY-721] 
'''is_a:''' [[:Category:GO:0042178 ! xenobiotic catabolic process|GO:0042178 ! xenobiotic catabolic process]] 
 

[[Category:GO:0042178 ! xenobiotic catabolic process]]
[[amigo-term:GO:0019335|AmiGO]]
<GOterm>GO:0019335</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019427 ! obsolete acetyl-CoA biosynthetic process from acetate

2026-03-30T11:05:32Z

Wikientrybot: Add page for GO:0019427_!_obsolete_acetyl-CoA_biosynthetic_process_from_acetate

<protect>{{Autobox|1=<GOfig>GO:0019427</GOfig>{{Warning|This GO term has been '''obsoleted'''. Do not annotate to it.}}
'''id:''' GO:0019427 
'''name:''' obsolete acetyl-CoA biosynthetic process from acetate 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "OBSOLETE. The chemical reactions and pathways resulting in the formation of acetyl-CoA from acetate, either directly or via acetylphosphate." [MetaCyc:ACETATEUTIL-PWY] 
'''comment:''' The reason for obsoletion is that this term represents a GO-CAM. 
'''synonym:''' "acetate utilization" RELATED [] 
'''synonym:''' "acetyl-CoA anabolism from acetate" EXACT [] 
'''synonym:''' "acetyl-CoA formation from acetate" EXACT [] 
'''synonym:''' "acetyl-CoA synthesis from acetate" EXACT [] 
'''is_obsolete:''' true 
'''replaced_by:''' [[:Category:GO:0006085 ! acetyl-CoA biosynthetic process|GO:0006085 ! acetyl-CoA biosynthetic process]] 
 

[[Category:GO:Obsolete]]
[[amigo-term:GO:0019427|AmiGO]]
<GOterm>GO:0019427</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019427 ! acetyl-CoA biosynthetic process from acetate

2026-03-30T11:05:31Z

Wikientrybot: GO:0019427_!_acetyl-CoA_biosynthetic_process_from_acetate renamed to GO:0019427_!_obsolete_acetyl-CoA_biosynthetic_process_from_acetate

#REDIRECT [[:Category:GO:0019427_!_obsolete_acetyl-CoA_biosynthetic_process_from_acetate]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019431 ! obsolete acetyl-CoA biosynthetic process from ethanol

2026-03-30T11:05:31Z

Wikientrybot: Add page for GO:0019431_!_obsolete_acetyl-CoA_biosynthetic_process_from_ethanol

<protect>{{Autobox|1=<GOfig>GO:0019431</GOfig>{{Warning|This GO term has been '''obsoleted'''. Do not annotate to it.}}
'''id:''' GO:0019431 
'''name:''' obsolete acetyl-CoA biosynthetic process from ethanol 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "OBSOLETE. The chemical reactions and pathways resulting in the formation of acetyl-CoA from ethanol via acetaldehyde." [GOC:curators] 
'''comment:''' The reason for obsoletion is that this term represents a GO-CAM. 
'''synonym:''' "acetyl-CoA anabolism from ethanol" EXACT [] 
'''synonym:''' "acetyl-CoA formation from ethanol" EXACT [] 
'''synonym:''' "acetyl-CoA synthesis from ethanol" EXACT [] 
'''is_obsolete:''' true 
'''replaced_by:''' [[:Category:GO:0006085 ! acetyl-CoA biosynthetic process|GO:0006085 ! acetyl-CoA biosynthetic process]] 
 

[[Category:GO:Obsolete]]
[[amigo-term:GO:0019431|AmiGO]]
<GOterm>GO:0019431</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019431 ! acetyl-CoA biosynthetic process from ethanol

2026-03-30T11:05:28Z

Wikientrybot: GO:0019431_!_acetyl-CoA_biosynthetic_process_from_ethanol renamed to GO:0019431_!_obsolete_acetyl-CoA_biosynthetic_process_from_ethanol

#REDIRECT [[:Category:GO:0019431_!_obsolete_acetyl-CoA_biosynthetic_process_from_ethanol]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019543 ! propionate catabolic process

2026-03-30T11:05:27Z

Wikientrybot: update GO:0019543_!_propionate_catabolic_process page

<protect>{{Autobox|1=<GOfig>GO:0019543</GOfig>'''id:''' GO:0019543 
'''name:''' propionate catabolic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid." [GOC:curators] 
'''synonym:''' "propionate breakdown" EXACT [] 
'''synonym:''' "propionate catabolism" EXACT [] 
'''synonym:''' "propionate degradation" EXACT [] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY-5747 MetaCyc:PWY-5747] 
'''xref:''' [https://biocyc.org/META/NEW-IMAGE?type=NIL&object=PWY0-42 MetaCyc:PWY0-42] 
'''is_a:''' [[:Category:GO:0019541 ! propionate metabolic process|GO:0019541 ! propionate metabolic process]] 
'''is_a:''' [[:Category:GO:0019626 ! short-chain fatty acid catabolic process|GO:0019626 ! short-chain fatty acid catabolic process]] 
 

[[Category:GO:0019541 ! propionate metabolic process]][[Category:GO:0019626 ! short-chain fatty acid catabolic process]]
[[amigo-term:GO:0019543|AmiGO]]
<GOterm>GO:0019543</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019629 ! propionate catabolic process, 2-methylcitrate cycle

2026-03-30T11:05:26Z

Wikientrybot: GO:0019629_!_propionate_catabolic_process,_2-methylcitrate_cycle renamed to GO:0019629_!_obsolete_propionate_catabolic_process,_2-methylcitrate_cycle

#REDIRECT [[:Category:GO:0019629_!_obsolete_propionate_catabolic_process,_2-methylcitrate_cycle]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019629 ! obsolete propionate catabolic process, 2-methylcitrate cycle

2026-03-30T11:05:26Z

Wikientrybot: Add page for GO:0019629_!_obsolete_propionate_catabolic_process,_2-methylcitrate_cycle

<protect>{{Autobox|1=<GOfig>GO:0019629</GOfig>{{Warning|This GO term has been '''obsoleted'''. Do not annotate to it.}}
'''id:''' GO:0019629 
'''name:''' obsolete propionate catabolic process, 2-methylcitrate cycle 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "OBSOLETE. The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle." [GOC:curators] 
'''comment:''' The reason for obsoletion is that the meaning of the term is too narrow. 
'''synonym:''' "propionate breakdown, 2-methylcitrate cycle" EXACT [] 
'''synonym:''' "propionate degradation, 2-methylcitrate cycle" EXACT [] 
'''is_obsolete:''' true 
'''replaced_by:''' [[:Category:GO:0019543 ! propionate catabolic process|GO:0019543 ! propionate catabolic process]] 
 

[[Category:GO:Obsolete]]
[[amigo-term:GO:0019629|AmiGO]]
<GOterm>GO:0019629</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019678 ! propionate metabolic process, methylmalonyl pathway

2026-03-30T11:05:25Z

Wikientrybot: GO:0019678_!_propionate_metabolic_process,_methylmalonyl_pathway renamed to GO:0019678_!_obsolete_propionate_metabolic_process,_methylmalonyl_pathway

#REDIRECT [[:Category:GO:0019678_!_obsolete_propionate_metabolic_process,_methylmalonyl_pathway]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019679 ! obsolete propionate metabolic process, methylcitrate cycle

2026-03-30T11:05:25Z

Wikientrybot: Add page for GO:0019679_!_obsolete_propionate_metabolic_process,_methylcitrate_cycle

<protect>{{Autobox|1=<GOfig>GO:0019679</GOfig>{{Warning|This GO term has been '''obsoleted'''. Do not annotate to it.}}
'''id:''' GO:0019679 
'''name:''' obsolete propionate metabolic process, methylcitrate cycle 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "OBSOLETE. The chemical reactions and pathways involving propionate that occur in the methylcitrate cycle." [GOC:curators] 
'''comment:''' The reason for obsoletion is that the meaning of the term is too narrow. 
'''synonym:''' "propionate metabolism, methylcitrate cycle" EXACT [] 
'''is_obsolete:''' true 
'''replaced_by:''' [[:Category:GO:0019543 ! propionate catabolic process|GO:0019543 ! propionate catabolic process]] 
 

[[Category:GO:Obsolete]]
[[amigo-term:GO:0019679|AmiGO]]
<GOterm>GO:0019679</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019678 ! obsolete propionate metabolic process, methylmalonyl pathway

2026-03-30T11:05:25Z

Wikientrybot: Add page for GO:0019678_!_obsolete_propionate_metabolic_process,_methylmalonyl_pathway

<protect>{{Autobox|1=<GOfig>GO:0019678</GOfig>{{Warning|This GO term has been '''obsoleted'''. Do not annotate to it.}}
'''id:''' GO:0019678 
'''name:''' obsolete propionate metabolic process, methylmalonyl pathway 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "OBSOLETE. The chemical reactions and pathways involving propionate that occur in the methylmalonyl pathway." [GOC:curators] 
'''comment:''' The reason for obsoletion is that the meaning of the term is too narrow. 
'''synonym:''' "methylmalonyl pathway" EXACT [] 
'''synonym:''' "propanoyl CoA degradation" EXACT [] 
'''synonym:''' "propionate metabolism, methylmalonyl pathway" EXACT [] 
'''is_obsolete:''' true 
'''replaced_by:''' [[:Category:GO:1902859 ! propionyl-CoA catabolic process|GO:1902859 ! propionyl-CoA catabolic process]] 
 

[[Category:GO:Obsolete]]
[[amigo-term:GO:0019678|AmiGO]]
<GOterm>GO:0019678</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019679 ! propionate metabolic process, methylcitrate cycle

2026-03-30T11:05:24Z

Wikientrybot: GO:0019679_!_propionate_metabolic_process,_methylcitrate_cycle renamed to GO:0019679_!_obsolete_propionate_metabolic_process,_methylcitrate_cycle

#REDIRECT [[:Category:GO:0019679_!_obsolete_propionate_metabolic_process,_methylcitrate_cycle]]
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019752 ! carboxylic acid metabolic process

2026-03-30T11:05:23Z

Wikientrybot: update GO:0019752_!_carboxylic_acid_metabolic_process page

<protect>{{Autobox|1=<GOfig>GO:0019752</GOfig>'''id:''' GO:0019752 
'''name:''' carboxylic acid metabolic process 
'''namespace:''' [[:Category:GO:0008150_!_biological_process|biological_process]] 
'''def:''' "The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-)." [ISBN:0198506732] 
'''subset:''' [[:Category:GO:gocheck_do_not_annotate|gocheck_do_not_annotate]] 
'''synonym:''' "carboxylic acid metabolism" EXACT [] 
'''is_a:''' [[:Category:GO:0043436 ! oxoacid metabolic process|GO:0043436 ! oxoacid metabolic process]] 
 

[[Category:GO:gocheck_do_not_annotate]][[Category:GO:0043436 ! oxoacid metabolic process]]
[[amigo-term:GO:0019752|AmiGO]]
<GOterm>GO:0019752</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0019773 ! proteasome core complex, alpha-subunit complex

2026-03-30T11:05:22Z

Wikientrybot: update GO:0019773_!_proteasome_core_complex,_alpha-subunit_complex page

<protect>{{Autobox|1=<GOfig>GO:0019773</GOfig>'''id:''' GO:0019773 
'''name:''' proteasome core complex, alpha-subunit complex 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus." [GOC:jl, GOC:mtg_sensu, GOC:rb, PMID:10854779] 
'''is_a:''' [[:Category:GO:0140535 ! intracellular protein-containing complex|GO:0140535 ! intracellular protein-containing complex]] 
'''relationship:''' part_of: [[:Category:GO:0005839 ! proteasome core complex|GO:0005839 ! proteasome core complex]] 
 

[[Category:GO:0140535 ! intracellular protein-containing complex]][[Category:GO:0005839 ! proteasome core complex]]
[[amigo-term:GO:0019773|AmiGO]]
<GOterm>GO:0019773</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0030312 ! external encapsulating structure

2026-03-30T11:05:21Z

Wikientrybot: update GO:0030312_!_external_encapsulating_structure page

<protect>{{Autobox|1=<GOfig>GO:0030312</GOfig>'''id:''' GO:0030312 
'''name:''' external encapsulating structure 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "A structure that lies outside the plasma membrane and surrounds the entire cell or cells. This does not include the periplasmic space." [GOC:curators] 
'''comment:''' The outer membrane (of gram negative bacteria) or cell wall (of yeast or Gram positive bacteria) are defined as parts of this structure, see 'external encapsulating structure part'. 
'''subset:''' [[:Category:GO:goslim_chembl|goslim_chembl]] 
'''subset:''' [[:Category:GO:goslim_drosophila|goslim_drosophila]] 
'''subset:''' [[:Category:GO:goslim_generic|goslim_generic]] 
'''subset:''' [[:Category:GO:goslim_pir|goslim_pir]] 
'''subset:''' [[:Category:GO:goslim_plant|goslim_plant]] 
'''is_a:''' [[:Category:GO:0110165 ! cellular anatomical structure|GO:0110165 ! cellular anatomical structure]] 
'''relationship:''' part_of: [[:Category:GO:0005576 ! extracellular region|GO:0005576 ! extracellular region]] 
 

[[Category:GO:goslim_chembl]][[Category:GO:goslim_drosophila]][[Category:GO:goslim_generic]][[Category:GO:goslim_pir]][[Category:GO:goslim_plant]][[Category:GO:0110165 ! cellular anatomical structure]][[Category:GO:0005576 ! extracellular region]]
[[amigo-term:GO:0030312|AmiGO]]
<GOterm>GO:0030312</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>

Category:GO:0030445 ! yeast-form cell wall

2026-03-30T11:05:21Z

Wikientrybot: update GO:0030445_!_yeast-form_cell_wall page

<protect>{{Autobox|1=<GOfig>GO:0030445</GOfig>'''id:''' GO:0030445 
'''name:''' yeast-form cell wall 
'''namespace:''' [[:Category:GO:0005575_!_cellular_component|cellular_component]] 
'''def:''' "The wall surrounding a cell of a dimorphic fungus growing in the single-cell budding yeast form, in contrast to the filamentous or hyphal form." [GOC:mah, GOC:mcc, PMID:36266346] 
'''comment:''' See also the Fungal Anatomy Ontology term 'vegetative cell ; FAO:0000032'. 
'''is_a:''' [[:Category:GO:0009277 ! fungal-type cell wall|GO:0009277 ! fungal-type cell wall]] 
 

[[Category:GO:0009277 ! fungal-type cell wall]]
[[amigo-term:GO:0030445|AmiGO]]
<GOterm>GO:0030445</GOterm> [http://geneontology.org Gene Ontology Home]
}}
</protect>
== Usage Notes ==

==References ==
{{RefHelp}}
<references/>