GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

TableEdit

Jump to: navigation, search

DANRE:DVR1

You don't have sufficient rights on this wiki to edit tables. Perhaps you need to log in. Changes you make in the Table editor will not be saved back to the wiki

See Help for Help on this wiki. See the documentation for how to use the table editor

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

public

GO:1904136

regulation of convergent extension involved in notochord morphogenesis

PMID:24892953

ECO:0000316

UniProtKB:Q06ZW3


P

In Figure 2 G-I, injection of Setdb2 morpholino will result in a wider and shorter notochord, however, when Dvr1 morpholino is co-injected with Setdb2 morpholino, the effects of setdb2 morpholino are reversed.

complete
CACAO 10544

public

GO:1904103

regulation of convergent extension involved in gastrulation

PMID:24892953

ECO:0000316

UniProtKB:Q06ZW3


P

In Figure 2 G-I injection of Setdb2 morpholino will result in a wider and shorter notochord, however, when Dvr1 morpholino is co-injected with Setdb2 morpholino, the effects of setdb2 morpholino are reversed.

complete
CACAO 10670

public

GO:1904086

regulation of epiboly involved in gastrulation with mouth forming second

PMID:24892953

ECO:0000315

P

In Figure 3 A-F, varying amounts of dvr1 mRNA are injected into embryos and compared to a control embryo. With larger amounts of dvr1 mRNA injection there are higher percentages of delayed epiboly, leading to the conclusion that dvr1 is involved in epiboly.

complete
CACAO 10672

public

GO:1904130

regulation of convergent extension involved in neural plate elongation

PMID:24892953

ECO:0000315

P

In figure 3 J and K, embryos injected with 10pg of DVR1 mRNA show broader neural plates than embryos not injected. This suggests involvement in neural plate morphogenesis.

complete
CACAO 10714

public

GO:1904127

regulation of convergent extension involved in somitogenesis

PMID:24892953

ECO:0000315

P

In figure 3 L and M, embryos injected with 10pg of DVR1 mRNA show wider and slightly shorter somites than embryos not injected. This suggests involvement in somitogenesis.

complete
CACAO 10715

protected

involved_in

GO:1904086

regulation of epiboly involved in gastrulation with mouth forming second

PMID:24892953

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

protected

involved_in

GO:1900145

regulation of nodal signaling pathway involved in determination of left/right asymmetry

PMID:23791819

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-140117-1

P

Seeded From UniProt

complete

protected

involved_in

GO:0060972

left/right pattern formation

PMID:29140250

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-100312-2

P

Seeded From UniProt

complete

protected

involved_in

GO:0060027

convergent extension involved in gastrulation

PMID:24892953

ECO:0000316

genetic interaction evidence used in manual assertion

ZFIN:ZDB-GENE-030131-7093

P

Seeded From UniProt

complete

protected

involved_in

GO:0060027

convergent extension involved in gastrulation

PMID:24892953

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-171103-2

P

Seeded From UniProt

complete

protected

involved_in

GO:0060027

convergent extension involved in gastrulation

PMID:24892953

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-100312-2

P

Seeded From UniProt

complete

protected

involved_in

GO:0048666

neuron development

PMID:22613031

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-100312-2

P

Seeded From UniProt

complete

protected

involved_in

GO:0048382

mesendoderm development

PMID:29140251

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-181004-3

P

Seeded From UniProt

complete

protected

involved_in

GO:0038092

nodal signaling pathway

PMID:29140251

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-181004-3

P

Seeded From UniProt

complete

protected

involved_in

GO:0038092

nodal signaling pathway

PMID:29140250

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-181002-11

P

Seeded From UniProt

complete

protected

part_of

GO:0032991

protein-containing complex

PMID:29140251

ECO:0000353

physical interaction evidence used in manual assertion

ZFIN:ZDB-GENE-990415-256

C

Seeded From UniProt

complete

protected

part_of

GO:0032991

protein-containing complex

PMID:29140251

ECO:0000353

physical interaction evidence used in manual assertion

ZFIN:ZDB-GENE-990415-181

C

Seeded From UniProt

complete

protected

involved_in

GO:0030509

BMP signaling pathway

PMID:29140250

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-181002-11

P

Seeded From UniProt

complete

protected

involved_in

GO:0009798

axis specification

PMID:29140249

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-181002-8

P

Seeded From UniProt

complete

protected

involved_in

GO:0001947

heart looping

PMID:22613031

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-100312-2

P

Seeded From UniProt

complete

protected

involved_in

GO:0001707

mesoderm formation

PMID:29140250

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-181002-11

P

Seeded From UniProt

complete

protected

involved_in

GO:0001706

endoderm formation

PMID:29140250

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-GENO-181002-11

P

Seeded From UniProt

complete

protected

involved_in

GO:0060395

SMAD protein signal transduction

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1338027
MGI:MGI:88180
MGI:MGI:88182
MGI:MGI:95689
MGI:MGI:97359
PANTHER:PTN000218063
UniProtKB:O95390
UniProtKB:P12643
UniProtKB:P12644
UniProtKB:P18075
UniProtKB:P22004
UniProtKB:P43026
UniProtKB:P61812
UniProtKB:Q6KF10
UniProtKB:Q99988

P

Seeded From UniProt

complete

protected

involved_in

GO:0048468

cell development

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:103302
PANTHER:PTN000218063

P

Seeded From UniProt

complete

protected

involved_in

GO:0043408

regulation of MAPK cascade

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107335
PANTHER:PTN000218063

P

Seeded From UniProt

complete

protected

involved_in

GO:0042981

regulation of apoptotic process

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:98726
PANTHER:PTN000218063

P

Seeded From UniProt

complete

protected

involved_in

GO:0030509

BMP signaling pathway

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88177
MGI:MGI:88180
MGI:MGI:95689
MGI:MGI:95690
PANTHER:PTN000218210
RGD:2211
UniProtKB:O95393
UniProtKB:P12643
UniProtKB:P12644
UniProtKB:Q6KF10
UniProtKB:Q7Z4P5
UniProtKB:Q9UK05

P

Seeded From UniProt

complete

protected

involved_in

GO:0010862

positive regulation of pathway-restricted SMAD protein phosphorylation

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107335
MGI:MGI:1338820
MGI:MGI:88182
MGI:MGI:95684
MGI:MGI:98727
PANTHER:PTN000218063
UniProtKB:O95393
UniProtKB:P01137
UniProtKB:P08476
UniProtKB:P12643
UniProtKB:P12644
UniProtKB:P18075
UniProtKB:P22003
UniProtKB:P22004
UniProtKB:Q6KF10
UniProtKB:Q7Z4P5
UniProtKB:Q96S42
UniProtKB:Q9UK05

P

Seeded From UniProt

complete

protected

part_of

GO:0005615

extracellular space

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0000490
MGI:MGI:103302
MGI:MGI:1338027
MGI:MGI:88177
MGI:MGI:88180
MGI:MGI:95691
MGI:MGI:98725
MGI:MGI:98726
PANTHER:PTN000218063
RGD:1305979
RGD:2211
RGD:2212
RGD:2213
RGD:2214
RGD:2912
RGD:2913
RGD:3115
RGD:3851
RGD:62074
RGD:620743
RGD:621512
RGD:69051
RGD:70491
UniProtKB:O14793
UniProtKB:O42220
UniProtKB:O95393
UniProtKB:P01137
UniProtKB:P12643
UniProtKB:P12644
UniProtKB:P18075
UniProtKB:P30371
UniProtKB:P61812
UniProtKB:Q96S42
UniProtKB:Q99988
WB:WBGene00000903

C

Seeded From UniProt

complete

protected

enables

GO:0005160

transforming growth factor beta receptor binding

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:98725
PANTHER:PTN000218063
UniProtKB:P61812

F

Seeded From UniProt

complete

protected

enables

GO:0005125

cytokine activity

PMID:21873635

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000218063
UniProtKB:P08476
UniProtKB:P12644

F

Seeded From UniProt

complete

protected

involved_in

GO:0010469

regulation of signaling receptor activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0008083

P

Seeded From UniProt

complete

protected

involved_in

GO:0010469

regulation of signaling receptor activity

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0005125

P

Seeded From UniProt

complete

protected

involved_in

GO:0010469

regulation of signaling receptor activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0008083

P

Seeded From UniProt

complete

protected

enables

GO:0008083

growth factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001839
InterPro:IPR017948

F

Seeded From UniProt

complete

protected

involved_in

GO:0051781

positive regulation of cell division

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0497

P

Seeded From UniProt

complete

protected

enables

GO:0008083

growth factor activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0339

F

Seeded From UniProt

complete

protected

part_of

GO:0005576

extracellular region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964
UniProtKB-SubCell:SL-0243

C

Seeded From UniProt

complete




Cancel