GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

TableEdit

Jump to: navigation, search

MOUSE:SMAD5

You don't have sufficient rights on this wiki to edit tables. Perhaps you need to log in. Changes you make in the Table editor will not be saved back to the wiki

See Help for Help on this wiki. See the documentation for how to use the table editor

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

protected

enables

GO:0001227

DNA-binding transcription repressor activity, RNA polymerase II-specific

GO_REF:0000036

ECO:0000305

curator inference used in manual assertion

GO:0000122,GO:0000977

F

Seeded From UniProt

complete

protected

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:22964636

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(NCBI_Gene:18590)

Seeded From UniProt

complete

protected

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

PMID:11729207

ECO:0000314

direct assay evidence used in manual assertion

F

has_regulation_target:(NCBI_Gene:15901)

Seeded From UniProt

complete

protected

involved_in

GO:0030509

BMP signaling pathway

PMID:19252488

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P20722

P

occurs_in:(UBERON:0002107)

Seeded From UniProt

complete

protected

involved_in

GO:0060395

SMAD protein signal transduction

PMID:19252488

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P20722

P

  • occurs_in:(UBERON:0002107)
  • part_of:(GO:0030509)

Seeded From UniProt

complete

protected

part_of

GO:0005737

cytoplasm

PMID:19252488

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(UBERON:0002107)

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

PMID:19252488

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(UBERON:0002107)

Seeded From UniProt

complete

protected

involved_in

GO:1901522

positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus

PMID:20843790

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P70340

P

part_of:(GO:0071773)

Seeded From UniProt

complete

protected

involved_in

GO:0071773

cellular response to BMP stimulus

PMID:20843790

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P70340

P

Seeded From UniProt

complete

protected

involved_in

GO:0030509

BMP signaling pathway

PMID:20843790

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P70340

P

Seeded From UniProt

complete

protected

involved_in

GO:0009880

embryonic pattern specification

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9W7E7

P

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

PMID:12151307

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

involved_in

GO:0001657

ureteric bud development

PMID:14656760

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0071407

cellular response to organic cyclic compound

PMID:19103752

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0060348

bone development

PMID:19224984

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:109452
MGI:MGI:1859993

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0060048

cardiac muscle contraction

PMID:17456754

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2679443

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0051216

cartilage development

PMID:19224984

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:109452
MGI:MGI:1859993

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:15557274

ECO:0000314

direct assay evidence used in manual assertion

P

has_regulation_target:(MGI:MGI:96429)

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0045669

positive regulation of osteoblast differentiation

PMID:15150273

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1316736

P

Seeded From UniProt

complete

protected

part_of

GO:0032991

protein-containing complex

PMID:23610558

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q99717

C

Seeded From UniProt

complete

protected

enables

GO:0031625

ubiquitin protein ligase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q99717

F

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0030509

BMP signaling pathway

PMID:19224984

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:109452
MGI:MGI:1859993

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0030509

BMP signaling pathway

PMID:18590716

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(EMAPA:16530)

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0030218

erythrocyte differentiation

PMID:15591122

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

protected

enables

GO:0017151

DEAD/H-box RNA helicase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q99717

F

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0007281

germ cell development

PMID:11404080

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • occurs_in:(EMAPA:16190)
  • results_in_development_of:(CL:0000670)

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0007179

transforming growth factor beta receptor signaling pathway

PMID:11376112

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0006468

protein phosphorylation

PMID:18776146

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

protected

part_of

GO:0005829

cytosol

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q99717

C

Seeded From UniProt

complete

protected

part_of

GO:0005737

cytoplasm

PMID:19103752

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

part_of

GO:0005654

nucleoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q99717

C

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

PMID:19793887

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

PMID:19103752

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0002051

osteoblast fate commitment

PMID:15150273

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1316736

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0001880

Mullerian duct regression

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:620158

P

Seeded From UniProt

complete

protected

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:18692037

ECO:0000314

direct assay evidence used in manual assertion

F

  • has_participant:(MGI:MGI:2661061)
  • occurs_in:(EMAPA:17525)

Seeded From UniProt

complete

protected

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q68DB7
ensembl:ENSP00000441954

C

Seeded From UniProt

complete

protected

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q68DB7
ensembl:ENSP00000441954

C

Seeded From UniProt

complete

protected

part_of

GO:0032991

protein-containing complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99717
ensembl:ENSP00000441954

C

Seeded From UniProt

complete

protected

enables

GO:0031625

ubiquitin protein ligase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99717
ensembl:ENSP00000441954

F

Seeded From UniProt

complete

protected

enables

GO:0017151

DEAD/H-box RNA helicase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99717
ensembl:ENSP00000441954

F

Seeded From UniProt

complete

protected

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99717
ensembl:ENSP00000441954

C

Seeded From UniProt

complete

protected

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q99717
ensembl:ENSP00000441954

C

Seeded From UniProt

complete

protected

involved_in

GO:0001880

Mullerian duct regression

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R1V3
ensembl:ENSRNOP00000016704

P

Seeded From UniProt

complete

protected

involved_in

GO:0001503

ossification

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R1V3
ensembl:ENSRNOP00000016704

P

Seeded From UniProt

complete

protected

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013019

F

Seeded From UniProt

complete

protected

part_of

GO:0005667

transcription factor complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013019

C

Seeded From UniProt

complete

protected

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001132
InterPro:IPR003619
InterPro:IPR013019
InterPro:IPR013790

P

Seeded From UniProt

complete

protected

involved_in

GO:0007179

transforming growth factor beta receptor signaling pathway

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013019
InterPro:IPR036578

P

Seeded From UniProt

complete

protected

acts_upstream_of_or_within

GO:0030509

BMP signaling pathway

PMID:12370310

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

protected

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

protected

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

protected

involved_in

GO:0001525

angiogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0037

P

Seeded From UniProt

complete

protected

involved_in

GO:0030154

cell differentiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0221

P

Seeded From UniProt

complete

protected

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

protected

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

protected

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete




Cancel