GONUTS has been updated to MW1.29.2. Most things seem to be working but be sure to report problems.

It is now the 6th OPEN Period for CACAO Spring 2018! It will end on Monday April 23, 2018 at 05:59 pm CDT
This is your chance to make annotations OR challenge other team's annotations. You may also DEFEND or suggest improvements to your own annotations IF they have been challenged. Please note, although we ENCOURAGE challenges, an excess of identical challenges that do not appear to be applicable to the annotation or well thought out will be considered spam and ignored.

It is now the 4th OPEN Period for CACAO Phage Hunters 2018! It will end on Sunday April 22, 2018 at 11:59 pm CDT
This is your chance to make annotations OR challenge other team's annotations. You may also DEFEND or suggest improvements to your own annotations IF they have been challenged. Please note, although we ENCOURAGE challenges, an excess of identical challenges that do not appear to be applicable to the annotation or well thought out will be considered spam and ignored.

Have any questions? Please email us at ecoliwiki@gmail.com

TableEdit

Jump to: navigation, search

DANRE:E7FB98

You don't have sufficient rights on this wiki to edit tables. Perhaps you need to log in. Changes you make in the Table editor will not be saved back to the wiki

See Help for Help on this wiki. See the documentation for how to use the table editor

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status

public

GO:0030656

regulation of vitamin metabolic process

PMID:23533172

IMP: Inferred from Mutant Phenotype

P

Figure 5: UBIAD1 regulates menaquinone/vitamin K2 metabolism to maintain cranial vasculature.

complete
CACAO 7318

public

GO:0006916

anti-apoptosis

PMID:23533172

IMP: Inferred from Mutant Phenotype

P

Figure 3: Vascular integrity and endothelial survival are compromised in reh mutants due to increased apoptosis.

complete
CACAO 7319

protected

GO:0000139

Golgi membrane

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0134

C

Seeded From UniProt

complete

protected

GO:0001885

endothelial cell development

PMID:23533172

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

protected

GO:0004517

nitric-oxide synthase activity

PMID:23374346

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-130327-5
ZFIN:ZDB-MRPHLNO-100503-13

F

Seeded From UniProt

complete

protected

GO:0004659

prenyltransferase activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000537

F

Seeded From UniProt

complete

protected

GO:0004659

prenyltransferase activity

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0637

F

Seeded From UniProt

complete

protected

GO:0004659

prenyltransferase activity

PMID:23374346

IDA: Inferred from Direct Assay

F

Seeded From UniProt

complete

protected

GO:0004659

prenyltransferase activity

PMID:23374346

IDA: Inferred from Direct Assay

F

Seeded From UniProt

complete

protected

GO:0004659

prenyltransferase activity

PMID:24177291

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-130327-4

F

Seeded From UniProt

complete

protected

GO:0005739

mitochondrion

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0496

C

Seeded From UniProt

complete

protected

GO:0005739

mitochondrion

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0173

C

Seeded From UniProt

complete

protected

GO:0005783

endoplasmic reticulum

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0256

C

Seeded From UniProt

complete

protected

GO:0005789

endoplasmic reticulum membrane

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0097

C

Seeded From UniProt

complete

protected

GO:0005794

Golgi apparatus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0333

C

Seeded From UniProt

complete

protected

GO:0005794

Golgi apparatus

PMID:23374346

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

protected

GO:0006744

ubiquinone biosynthetic process

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0831

P

Seeded From UniProt

complete

protected

GO:0006744

ubiquinone biosynthetic process

GO_REF:0000041

IEA: Inferred from Electronic Annotation

UniPathway:UPA00232

P

Seeded From UniProt

complete

protected

GO:0006744

ubiquinone biosynthetic process

PMID:23374346

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

protected

GO:0006744

ubiquinone biosynthetic process

PMID:23374346

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-130327-4

P

Seeded From UniProt

complete

protected

GO:0006744

ubiquinone biosynthetic process

PMID:23374346

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-130327-5

P

Seeded From UniProt

complete

protected

GO:0009234

menaquinone biosynthetic process

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0474

P

Seeded From UniProt

complete

protected

GO:0009234

menaquinone biosynthetic process

GO_REF:0000041

IEA: Inferred from Electronic Annotation

UniPathway:UPA00079

P

Seeded From UniProt

complete

protected

GO:0009234

menaquinone biosynthetic process

PMID:23533172

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

protected

GO:0016020

membrane

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

protected

GO:0016021

integral component of membrane

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000537

C

Seeded From UniProt

complete

protected

GO:0016021

integral component of membrane

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

protected

GO:0016209

antioxidant activity

PMID:23374346

IMP: Inferred from Mutant Phenotype

F

Seeded From UniProt

complete

protected

GO:0016740

transferase activity

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

protected

GO:0030173

integral component of Golgi membrane

PMID:23374346

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

protected

GO:0032194

ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate

PMID:24177291

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-130327-4

P

Seeded From UniProt

complete

protected

GO:0042371

vitamin K biosynthetic process

PMID:23533172

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

protected

GO:0055114

oxidation-reduction process

PMID:23374346

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-130327-5
ZFIN:ZDB-MRPHLNO-100503-13

P

Seeded From UniProt

complete

protected

GO:0071498

cellular response to fluid shear stress

PMID:23374346

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-130327-5
ZFIN:ZDB-MRPHLNO-060317-4

P

Seeded From UniProt

complete

protected

GO:0071498

cellular response to fluid shear stress

PMID:23374346

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-130327-5
ZFIN:ZDB-MRPHLNO-100610-8

P

Seeded From UniProt

complete

protected

GO:0072358

cardiovascular system development

PMID:23374346

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

protected

GO:0072358

cardiovascular system development

PMID:23374346

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-130327-4

P

Seeded From UniProt

complete

protected

GO:0072358

cardiovascular system development

PMID:23374346

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-130327-5

P

Seeded From UniProt

complete

protected

GO:0072358

cardiovascular system development

PMID:23374346

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-130327-5

P

Seeded From UniProt

complete

protected

GO:0072358

cardiovascular system development

PMID:23533172

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete




Cancel