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TableEdit
PSEAE:FABY
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| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status | |
|---|---|---|---|---|---|---|---|---|---|---|---|
|
public |
GO:0033818 |
beta-ketoacyl-acyl-carrier-protein synthase III activity |
PMID:22753059 |
ECO:0000314 |
F |
Figure 8a: NADPH consumption of PA5174 and E. coli FabH were similar |
complete | ||||
|
public |
GO:0006633 |
fatty acid biosynthetic process |
PMID:22753059 |
ECO:0000315 |
P |
Figure 4B: The PA5174 incapacitated mutant displayed a lower percent incorporated label than the wild type. |
complete | ||||
|
public |
GO:0009372 |
quorum sensing |
PMID:22753059 |
ECO:0000315 |
P |
Figure 5A: Production of acyl-homoserine lactone decreased in PA5174 incapacitated mutants and increased in PA5174 complemented mutants (TMT41) Figure 5B: Wild-type strain and TMT41 mutants produced halos indicating ion-pairing complexation between methylene blue dye, cetyltrimethylammonium bromide, and secreted rhamnolipids but mutant with nonfunctional PA5174 did not. Figure 5C: Rhamnose levels were higher in TMT41 mutant than in wild type. Rhamnose levels were also lower in mutant with nonfunctional PA5174 than in wild type. |
complete | ||||
|
public |
GO:0019290 |
siderophore biosynthetic process |
PMID:22753059 |
ECO:0000315 |
P |
Figure 7: Wild-type, mutant strain without PA5174, PA5174 back-complemented with plasmid, and FabH-complemented strain were streaked on LB-chrome azurol S indicator plates. Only the PA5174 deficient strain displayed no signs of iron sequestration (no yellow border around bacteria). |
complete | ||||
|
public |
GO:0009245 |
lipid A biosynthetic process |
PMID:24145528 |
ECO:0000315 |
P |
Figure 4: Spectra for wild-type and fabY-complemented mutant strain were similar, spectrum for fabY deficient strain was different Table 2: almost every lipid A species in fabY deficient strain was modified with L-Ara4N |
complete | ||||
|
protected |
involved_in |
GO:0009245 |
lipid A biosynthetic process |
PMID:24145528 |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
protected |
involved_in |
GO:0019290 |
siderophore biosynthetic process |
PMID:22753059 |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
protected |
involved_in |
GO:0009372 |
quorum sensing |
PMID:22753059 |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
protected |
involved_in |
GO:0006633 |
fatty acid biosynthetic process |
PMID:22753059 |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
protected |
enables |
GO:0033818 |
beta-ketoacyl-acyl-carrier-protein synthase III activity |
PMID:22753059 |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | ||
|
protected |
enables |
GO:0003824 |
catalytic activity |
GO_REF:0000002 |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR016039 |
F |
Seeded From UniProt |
complete | |
|
protected |
enables |
GO:0033818 |
beta-ketoacyl-acyl-carrier-protein synthase III activity |
GO_REF:0000003 |
ECO:0000501 |
evidence used in automatic assertion |
EC:2.3.1.180 |
F |
Seeded From UniProt |
complete | |
|
protected |
enables |
GO:0016746 |
transferase activity, transferring acyl groups |
GO_REF:0000037 |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0012 |
F |
Seeded From UniProt |
complete | |
|
protected |
involved_in |
GO:0006631 |
fatty acid metabolic process |
GO_REF:0000037 |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0276 |
P |
Seeded From UniProt |
complete | |
|
protected |
involved_in |
GO:0006633 |
fatty acid biosynthetic process |
GO_REF:0000037 |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0275 |
P |
Seeded From UniProt |
complete | |
|
protected |
involved_in |
GO:0006629 |
lipid metabolic process |
GO_REF:0000037 |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0443 |
P |
Seeded From UniProt |
complete | |
|
protected |
enables |
GO:0016740 |
transferase activity |
GO_REF:0000037 |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniProtKB-KW:KW-0808 |
F |
Seeded From UniProt |
complete |
| Cancel |
