ZFIN:wnt5b

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Annotations

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes
	GO:0001501	skeletal system development	ZFIN:ZDB-PUB-980520-2 PMID:9598355^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1367	P	From ZFIN
	GO:0001501	skeletal system development	ZFIN:ZDB-PUB-980520-2 PMID:9598355^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1371	P	From ZFIN
	GO:0001525	angiogenesis	ZFIN:ZDB-PUB-080922-12 PMID:18798004^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-090915-2	P	From ZFIN
	GO:0001525	angiogenesis	ZFIN:ZDB-PUB-080922-12 PMID:18798004^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-090915-1	P	From ZFIN
	GO:0001667	ameboidal cell migration	ZFIN:ZDB-PUB-051101-8 PMID:16246260^[3]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-051207-1	P	From ZFIN
	GO:0002062	chondrocyte differentiation	ZFIN:ZDB-PUB-970210-30 PMID:9007254^[4]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1002	P	From ZFIN
	GO:0002062	chondrocyte differentiation	ZFIN:ZDB-PUB-970210-30 PMID:9007254^[4]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1366	P	From ZFIN
	GO:0002062	chondrocyte differentiation	ZFIN:ZDB-PUB-970210-30 PMID:9007254^[4]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1367	P	From ZFIN
	GO:0002062	chondrocyte differentiation	ZFIN:ZDB-PUB-970210-30 PMID:9007254^[4]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1370	P	From ZFIN
	GO:0005102	receptor binding	ZFIN:ZDB-PUB-020724-1	IEA: Inferred from Electronic Annotation	InterPro:IPR005817	F	From ZFIN
	GO:0005102	receptor binding	ZFIN:ZDB-PUB-100730-13 PMID:20660632^[5]	IPI: Inferred from Physical Interaction	ZFIN:ZDB-GENE-070209-277	F	From ZFIN
	GO:0005110	frizzled-2 binding	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN265	F	From ZFIN
	GO:0005576	extracellular region	ZFIN:ZDB-PUB-020723-1	IEA: Inferred from Electronic Annotation	UniProtKB-KW:KW-0964	C	From ZFIN
	GO:0005576	extracellular region	ZFIN:ZDB-PUB-020724-1	IEA: Inferred from Electronic Annotation	InterPro:IPR005817	C	From ZFIN
	GO:0005578	proteinaceous extracellular matrix	ZFIN:ZDB-PUB-020723-1	IEA: Inferred from Electronic Annotation	UniProtKB-KW:KW-0272	C	From ZFIN
	GO:0005578	proteinaceous extracellular matrix	ZFIN:ZDB-PUB-120306-4	IEA: Inferred from Electronic Annotation	UniProtKB-SubCell:SL-0111	C	From ZFIN
	GO:0005615	extracellular space	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN0	C	From ZFIN
	GO:0005886	plasma membrane	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN0	C	From ZFIN
	GO:0007223	Wnt receptor signaling pathway, calcium modulating pathway	ZFIN:ZDB-PUB-051101-8 PMID:16246260^[3]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-MRPHLNO-051207-1 ZFIN:ZDB-MRPHLNO-051207-2 ZFIN:ZDB-MRPHLNO-051207-3	P	From ZFIN
	GO:0007223	Wnt receptor signaling pathway, calcium modulating pathway	ZFIN:ZDB-PUB-100730-13 PMID:20660632^[5]	IDA: Inferred from Direct Assay		P	From ZFIN
	GO:0007275	multicellular organismal development	ZFIN:ZDB-PUB-020723-1	IEA: Inferred from Electronic Annotation	UniProtKB-KW:KW-0217	P	From ZFIN
	GO:0007275	multicellular organismal development	ZFIN:ZDB-PUB-020724-1	IEA: Inferred from Electronic Annotation	InterPro:IPR005817	P	From ZFIN
	GO:0008591	regulation of Wnt receptor signaling pathway, calcium modulating pathway	ZFIN:ZDB-PUB-100719-56 PMID:20628572^[6]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-MRPHLNO-110523-7	P	From ZFIN
	GO:0008591	regulation of Wnt receptor signaling pathway, calcium modulating pathway	ZFIN:ZDB-PUB-100719-56 PMID:20628572^[6]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-090915-1	P	From ZFIN
	GO:0009826	unidimensional cell growth	ZFIN:ZDB-PUB-030408-5 PMID:12676324^[7]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-100614-2	P	From ZFIN
	GO:0009826	unidimensional cell growth	ZFIN:ZDB-PUB-030408-5 PMID:12676324^[7]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-041217-11	P	From ZFIN
	GO:0009950	dorsal/ventral axis specification	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN265	P	From ZFIN
	GO:0009952	anterior/posterior pattern specification	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN0	P	From ZFIN
	GO:0010172	embryonic body morphogenesis	ZFIN:ZDB-PUB-980520-2 PMID:9598355^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1367	P	From ZFIN
	GO:0010172	embryonic body morphogenesis	ZFIN:ZDB-PUB-980520-2 PMID:9598355^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1371	P	From ZFIN
	GO:0016055	Wnt receptor signaling pathway	ZFIN:ZDB-PUB-020723-1	IEA: Inferred from Electronic Annotation	UniProtKB-KW:KW-0879	P	From ZFIN
	GO:0016055	Wnt receptor signaling pathway	ZFIN:ZDB-PUB-020724-1	IEA: Inferred from Electronic Annotation	InterPro:IPR005817	P	From ZFIN
	GO:0031018	endocrine pancreas development	ZFIN:ZDB-PUB-051101-8 PMID:16246260^[3]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-051207-1	P	From ZFIN
	GO:0031101	fin regeneration	ZFIN:ZDB-PUB-061229-24 PMID:17185322^[8]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-980202-1367	P	From ZFIN
	GO:0031101	fin regeneration	ZFIN:ZDB-PUB-090526-2 PMID:19445916^[9]	IMP: Inferred from Mutant Phenotype		P	From ZFIN
	GO:0042074	cell migration involved in gastrulation	ZFIN:ZDB-PUB-050718-9 PMID:16019189^[10]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-041217-11	P	From ZFIN
	GO:0042074	cell migration involved in gastrulation	ZFIN:ZDB-PUB-061020-33 PMID:17032765^[11]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-MRPHLNO-041217-10 ZFIN:ZDB-MRPHLNO-041217-11	P	From ZFIN
	GO:0045600	positive regulation of fat cell differentiation	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN347	P	From ZFIN
	GO:0051209	release of sequestered calcium ion into cytosol	ZFIN:ZDB-PUB-100730-13 PMID:20660632^[5]	IDA: Inferred from Direct Assay		P	From ZFIN
	GO:0060026	convergent extension	ZFIN:ZDB-PUB-071009-3 PMID:17906624^[12]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-GENO-080222-3 ZFIN:ZDB-MRPHLNO-060126-1	P	From ZFIN
	GO:0060026	convergent extension	ZFIN:ZDB-PUB-071009-3 PMID:17906624^[12]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-GENO-080222-3 ZFIN:ZDB-MRPHLNO-060208-1	P	From ZFIN
	GO:0060026	convergent extension	ZFIN:ZDB-PUB-071009-3 PMID:17906624^[12]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-GENO-080222-3 ZFIN:ZDB-MRPHLNO-060208-2	P	From ZFIN
	GO:0060027	convergent extension involved in gastrulation	ZFIN:ZDB-PUB-030408-5 PMID:12676324^[7]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-100614-2	P	From ZFIN
	GO:0060027	convergent extension involved in gastrulation	ZFIN:ZDB-PUB-030408-5 PMID:12676324^[7]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-041217-11	P	From ZFIN
	GO:0060027	convergent extension involved in gastrulation	ZFIN:ZDB-PUB-070304-1 PMID:15815683^[13]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-MRPHLNO-041217-11 ZFIN:ZDB-MRPHLNO-050128-3 ZFIN:ZDB-MRPHLNO-070304-3	P	From ZFIN
	GO:0060027	convergent extension involved in gastrulation	ZFIN:ZDB-PUB-070304-1 PMID:15815683^[13]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-041217-11	P	From ZFIN
	GO:0060027	convergent extension involved in gastrulation	ZFIN:ZDB-PUB-080102-1 PMID:18159945^[14]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-MRPHLNO-041217-11 ZFIN:ZDB-MRPHLNO-080801-1	P	From ZFIN
	GO:0060027	convergent extension involved in gastrulation	ZFIN:ZDB-PUB-080102-1 PMID:18159945^[14]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-041217-11	P	From ZFIN
	GO:0060028	convergent extension involved in axis elongation	ZFIN:ZDB-PUB-080309-1 PMID:14660439^[15]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-GENO-080512-4	P	From ZFIN
	GO:0060028	convergent extension involved in axis elongation	ZFIN:ZDB-PUB-100730-13 PMID:20660632^[5]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-MRPHLNO-090915-1 ZFIN:ZDB-MRPHLNO-100805-1	P	From ZFIN
	GO:0060028	convergent extension involved in axis elongation	ZFIN:ZDB-PUB-100730-13 PMID:20660632^[5]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-090915-1	P	From ZFIN
	GO:0060030	dorsal convergence	ZFIN:ZDB-PUB-100730-13 PMID:20660632^[5]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-090915-1 ZFIN:ZDB-MRPHLNO-100805-1	P	From ZFIN
	GO:0060541	respiratory system development	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN265	P	From ZFIN
	GO:0061053	somite development	ZFIN:ZDB-PUB-100719-56 PMID:20628572^[6]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-MRPHLNO-110523-7	P	From ZFIN
	GO:0090090	negative regulation of canonical Wnt receptor signaling pathway	ZFIN:ZDB-PUB-110330-1		PANTHER:PTHR12027_AN347	P	From ZFIN
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Rauch GJ et al. (1997) Wnt5 is required for tail formation in the zebrafish embryo. Cold Spring Harb Symp Quant Biol 62: 227-34 PubMed GONUTS page
↑ ^2.0 ^2.1 Cirone P et al. (2008) A role for planar cell polarity signaling in angiogenesis. Angiogenesis 11: 347-60 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 Kim HJ et al. (2005) Wnt5 signaling in vertebrate pancreas development. BMC Biol 3: 23 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 Piotrowski T et al. (1996) Jaw and branchial arch mutants in zebrafish II: anterior arches and cartilage differentiation. Development 123: 345-56 PubMed GONUTS page
↑ ^5.0 ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 Lin S et al. (2010) Wnt5b-Ryk pathway provides directional signals to regulate gastrulation movement. J Cell Biol 190: 263-78 PubMed GONUTS page
↑ ^6.0 ^6.1 ^6.2 Freisinger CM et al. (2010) Regulator of g protein signaling 3 modulates wnt5b calcium dynamics and somite patterning. PLoS Genet 6: e1001020 PubMed GONUTS page
↑ ^7.0 ^7.1 ^7.2 ^7.3 Kilian B et al. (2003) The role of Ppt/Wnt5 in regulating cell shape and movement during zebrafish gastrulation. Mech Dev 120: 467-76 PubMed GONUTS page
↑ Stoick-Cooper CL et al. (2007) Distinct Wnt signaling pathways have opposing roles in appendage regeneration. Development 134: 479-89 PubMed GONUTS page
↑ Lee Y et al. (2009) Maintenance of blastemal proliferation by functionally diverse epidermis in regenerating zebrafish fins. Dev Biol 331: 270-80 PubMed GONUTS page
↑ Zhu S et al. (2006) RhoA acts downstream of Wnt5 and Wnt11 to regulate convergence and extension movements by involving effectors Rho kinase and Diaphanous: use of zebrafish as an in vivo model for GTPase signaling. Cell Signal 18: 359-72 PubMed GONUTS page
↑ Moeller H et al. (2006) Diversin regulates heart formation and gastrulation movements in development. Proc Natl Acad Sci U S A 103: 15900-5 PubMed GONUTS page
↑ ^12.0 ^12.1 ^12.2 Gerdes JM et al. (2007) Disruption of the basal body compromises proteasomal function and perturbs intracellular Wnt response. Nat Genet 39: 1350-60 PubMed GONUTS page
↑ ^13.0 ^13.1 Jopling C & den Hertog J (2005) Fyn/Yes and non-canonical Wnt signalling converge on RhoA in vertebrate gastrulation cell movements. EMBO Rep 6: 426-31 PubMed GONUTS page
↑ ^14.0 ^14.1 Jopling C et al. (2007) Shp2 knockdown and Noonan/LEOPARD mutant Shp2-induced gastrulation defects. PLoS Genet 3: e225 PubMed GONUTS page
↑ Marlow F et al. (2004) No tail co-operates with non-canonical Wnt signaling to regulate posterior body morphogenesis in zebrafish. Development 131: 203-16 PubMed GONUTS page

[PMID:9598355-0] 1.0 ^1.1 ^1.2 ^1.3 Rauch GJ et al. (1997) Wnt5 is required for tail formation in the zebrafish embryo. Cold Spring Harb Symp Quant Biol 62: 227-34 PubMed GONUTS page

[PMID:18798004-1] 2.0 ^2.1 Cirone P et al. (2008) A role for planar cell polarity signaling in angiogenesis. Angiogenesis 11: 347-60 PubMed GONUTS page

[PMID:16246260-2] 3.0 ^3.1 ^3.2 Kim HJ et al. (2005) Wnt5 signaling in vertebrate pancreas development. BMC Biol 3: 23 PubMed GONUTS page

[PMID:9007254-3] 4.0 ^4.1 ^4.2 ^4.3 Piotrowski T et al. (1996) Jaw and branchial arch mutants in zebrafish II: anterior arches and cartilage differentiation. Development 123: 345-56 PubMed GONUTS page

[PMID:20660632-4] 5.0 ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 Lin S et al. (2010) Wnt5b-Ryk pathway provides directional signals to regulate gastrulation movement. J Cell Biol 190: 263-78 PubMed GONUTS page

[PMID:20628572-5] 6.0 ^6.1 ^6.2 Freisinger CM et al. (2010) Regulator of g protein signaling 3 modulates wnt5b calcium dynamics and somite patterning. PLoS Genet 6: e1001020 PubMed GONUTS page

[PMID:12676324-6] 7.0 ^7.1 ^7.2 ^7.3 Kilian B et al. (2003) The role of Ppt/Wnt5 in regulating cell shape and movement during zebrafish gastrulation. Mech Dev 120: 467-76 PubMed GONUTS page

[PMID:17185322-7] Stoick-Cooper CL et al. (2007) Distinct Wnt signaling pathways have opposing roles in appendage regeneration. Development 134: 479-89 PubMed GONUTS page

[PMID:19445916-8] Lee Y et al. (2009) Maintenance of blastemal proliferation by functionally diverse epidermis in regenerating zebrafish fins. Dev Biol 331: 270-80 PubMed GONUTS page

[PMID:16019189-9] Zhu S et al. (2006) RhoA acts downstream of Wnt5 and Wnt11 to regulate convergence and extension movements by involving effectors Rho kinase and Diaphanous: use of zebrafish as an in vivo model for GTPase signaling. Cell Signal 18: 359-72 PubMed GONUTS page

[PMID:17032765-10] Moeller H et al. (2006) Diversin regulates heart formation and gastrulation movements in development. Proc Natl Acad Sci U S A 103: 15900-5 PubMed GONUTS page

[PMID:17906624-11] 12.0 ^12.1 ^12.2 Gerdes JM et al. (2007) Disruption of the basal body compromises proteasomal function and perturbs intracellular Wnt response. Nat Genet 39: 1350-60 PubMed GONUTS page

[PMID:15815683-12] 13.0 ^13.1 Jopling C & den Hertog J (2005) Fyn/Yes and non-canonical Wnt signalling converge on RhoA in vertebrate gastrulation cell movements. EMBO Rep 6: 426-31 PubMed GONUTS page

[PMID:18159945-13] 14.0 ^14.1 Jopling C et al. (2007) Shp2 knockdown and Noonan/LEOPARD mutant Shp2-induced gastrulation defects. PLoS Genet 3: e225 PubMed GONUTS page

[PMID:14660439-14] Marlow F et al. (2004) No tail co-operates with non-canonical Wnt signaling to regulate posterior body morphogenesis in zebrafish. Development 131: 203-16 PubMed GONUTS page

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Species (Taxon ID)	Danio rerio (zebrafish) (taxon:7955)
Gene Name(s)	wnt5b
Protein Name(s)	wingless-type MMTV integration site family, member 5b,
External Links
ZFIN	ZDB-GENE-980526-87

ZFIN:wnt5b

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