Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

ZFIN:tcf21

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) tcf21
Protein Name(s) transcription factor 21,
External Links
ZFIN ZDB-GENE-051113-88

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000122

negative regulation of transcription from RNA polymerase II promoter

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0001077

RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

F

From ZFIN

GO:0001078

RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

F

From ZFIN

GO:0001658

branching involved in ureteric bud morphogenesis

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0001822

kidney development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-100719-53
PMID:20627128[1]

IDA: Inferred from Direct Assay

C

From ZFIN

GO:0006351

transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

From ZFIN

GO:0007519

skeletal muscle tissue development

ZFIN:ZDB-PUB-110316-30
PMID:21347725[2]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-111214-4

P

From ZFIN

GO:0007519

skeletal muscle tissue development

ZFIN:ZDB-PUB-110316-30
PMID:21347725[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111214-1

P

From ZFIN

GO:0007530

sex determination

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0014707

branchiomeric skeletal muscle development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0030154

cell differentiation

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0221

P

From ZFIN

GO:0030855

epithelial cell differentiation

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0046983

protein dimerization activity

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:P15806

F

From ZFIN

GO:0048286

lung alveolus development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0048536

spleen development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0048557

embryonic digestive tract morphogenesis

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:Q498R2

P

From ZFIN

GO:0048608

reproductive structure development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0048732

gland development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:Q498R2

P

From ZFIN

GO:0060008

Sertoli cell differentiation

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:Q498R2

P

From ZFIN

GO:0060021

palate development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0060425

lung morphogenesis

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0060426

lung vasculature development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0060435

bronchiole development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0060539

diaphragm development

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0060766

negative regulation of androgen receptor signaling pathway

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0070888

E-box binding

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

F

From ZFIN

GO:0072162

metanephric mesenchymal cell differentiation

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN

GO:0072277

metanephric glomerular capillary formation

ZFIN:ZDB-PUB-110105-1

ISS: Inferred from Sequence or Structural Similarity

UniProtKB:O35437

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. Chou CY et al. (2011) Biochemical and structural properties of zebrafish Capsulin produced by Escherichia coli. Protein Expr Purif 75: 21-7 PubMed GONUTS page
  2. 2.0 2.1 Lee GH et al. (2011) Essential roles of basic helix-loop-helix transcription factors, Capsulin and Musculin, during craniofacial myogenesis of zebrafish. Cell Mol Life Sci 68: 4065-78 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox