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ZFIN:sox32
Contents |
| Species (Taxon ID) | Danio rerio (zebrafish) (taxon:7955) | |
| Gene Name(s) | sox32 | |
| Protein Name(s) | SRY-box containing gene 32, | |
| External Links | ||
| ZFIN | ZDB-GENE-011026-1 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0001706 |
endoderm formation |
ZFIN:ZDB-PUB-010706-3 |
IMP: Inferred from Mutant Phenotype |
P |
From ZFIN |
|||
| GO:0001706 |
endoderm formation |
ZFIN:ZDB-PUB-051005-5 |
IMP: Inferred from Mutant Phenotype |
P |
From ZFIN |
|||
| GO:0001706 |
endoderm formation |
ZFIN:ZDB-PUB-060207-10 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-MRPHLNO-050818-2 |
P |
From ZFIN |
||
| GO:0001706 |
endoderm formation |
ZFIN:ZDB-PUB-060508-12 |
IDA: Inferred from Direct Assay |
P |
From ZFIN |
|||
| GO:0001885 |
endothelial cell development |
ZFIN:ZDB-PUB-090921-6 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-GENO-120127-9 |
P |
From ZFIN |
||
| GO:0003007 |
heart morphogenesis |
ZFIN:ZDB-PUB-970210-25 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-GENO-980202-572 |
P |
From ZFIN |
||
| GO:0003677 |
DNA binding |
ZFIN:ZDB-PUB-040211-2 |
IDA: Inferred from Direct Assay |
F |
From ZFIN |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
ZFIN:ZDB-PUB-040211-2 |
IDA: Inferred from Direct Assay |
F |
From ZFIN |
|||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
ZFIN:ZDB-PUB-040211-2 |
IGI: Inferred from Genetic Interaction |
ZFIN:ZDB-GENE-980526-485 |
F |
From ZFIN |
||
| GO:0005634 |
nucleus |
ZFIN:ZDB-PUB-040211-2 |
IC: Inferred by Curator |
GO:0003677 |
C |
From ZFIN |
||
| GO:0007368 |
determination of left/right symmetry |
ZFIN:ZDB-PUB-030206-1 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-GENO-980202-572 |
P |
From ZFIN |
||
| GO:0007492 |
endoderm development |
ZFIN:ZDB-PUB-010706-4 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-MRPHLNO-051216-6 |
P |
From ZFIN |
||
| GO:0007492 |
endoderm development |
ZFIN:ZDB-PUB-080309-18 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-MRPHLNO-051216-6 |
P |
From ZFIN |
||
| GO:0007493 |
endodermal cell fate determination |
ZFIN:ZDB-PUB-020221-1 |
IMP: Inferred from Mutant Phenotype |
P |
From ZFIN |
|||
| GO:0007498 |
mesoderm development |
ZFIN:ZDB-PUB-061020-28 |
IDA: Inferred from Direct Assay |
P |
From ZFIN |
|||
| GO:0010468 |
regulation of gene expression |
ZFIN:ZDB-PUB-010706-3 |
IMP: Inferred from Mutant Phenotype |
P |
From ZFIN |
|||
| GO:0035050 |
embryonic heart tube development |
ZFIN:ZDB-PUB-990920-1 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-GENO-980202-572 |
P |
From ZFIN |
||
| GO:0042074 |
cell migration involved in gastrulation |
ZFIN:ZDB-PUB-080309-18 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-MRPHLNO-051216-6 |
P |
From ZFIN |
||
| GO:0045893 |
positive regulation of transcription, DNA-dependent |
ZFIN:ZDB-PUB-040211-2 |
IDA: Inferred from Direct Assay |
P |
From ZFIN |
|||
| GO:0045893 |
positive regulation of transcription, DNA-dependent |
ZFIN:ZDB-PUB-040211-2 |
IGI: Inferred from Genetic Interaction |
ZFIN:ZDB-GENE-980526-485 |
P |
From ZFIN |
||
| GO:0061035 |
regulation of cartilage development |
ZFIN:ZDB-PUB-120106-5 |
IGI: Inferred from Genetic Interaction |
ZFIN:ZDB-GENO-120220-6 |
P |
From ZFIN |
||
| GO:0061035 |
regulation of cartilage development |
ZFIN:ZDB-PUB-120106-5 |
IMP: Inferred from Mutant Phenotype |
ZFIN:ZDB-GENO-980202-572 |
P |
From ZFIN |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Kikuchi Y et al. (2001) casanova encodes a novel Sox-related protein necessary and sufficient for early endoderm formation in zebrafish. Genes Dev 15: 1493-505 PubMed GONUTS page
- ↑ Bjornson CR et al. (2005) Eomesodermin is a localized maternal determinant required for endoderm induction in zebrafish. Dev Cell 9: 523-33 PubMed GONUTS page
- ↑ Stafford D et al. (2006) Retinoids signal directly to zebrafish endoderm to specify insulin-expressing beta-cells. Development 133: 949-56 PubMed GONUTS page
- ↑ Poulain M et al. (2006) Zebrafish endoderm formation is regulated by combinatorial Nodal, FGF and BMP signalling. Development 133: 2189-200 PubMed GONUTS page
- ↑ Lee CY et al. (2009) Notch signaling functions as a cell-fate switch between the endothelial and hematopoietic lineages. Curr Biol 19: 1616-22 PubMed GONUTS page
- ↑ Chen JN et al. (1996) Mutations affecting the cardiovascular system and other internal organs in zebrafish. Development 123: 293-302 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 7.4 7.5 Reim G et al. (2004) The POU domain protein spg (pou2/Oct4) is essential for endoderm formation in cooperation with the HMG domain protein casanova. Dev Cell 6: 91-101 PubMed GONUTS page
- ↑ Gamse JT et al. (2003) The parapineal mediates left-right asymmetry in the zebrafish diencephalon. Development 130: 1059-68 PubMed GONUTS page
- ↑ Dickmeis T et al. (2001) A crucial component of the endoderm formation pathway, CASANOVA, is encoded by a novel sox-related gene. Genes Dev 15: 1487-92 PubMed GONUTS page
- ↑ 10.0 10.1 Pézeron G et al. (2008) Live analysis of endodermal layer formation identifies random walk as a novel gastrulation movement. Curr Biol 18: 276-81 PubMed GONUTS page
- ↑ Aoki TO et al. (2002) Molecular integration of casanova in the Nodal signalling pathway controlling endoderm formation. Development 129: 275-86 PubMed GONUTS page
- ↑ Mizoguchi T et al. (2006) Fgf signaling negatively regulates Nodal-dependent endoderm induction in zebrafish. Dev Biol 300: 612-22 PubMed GONUTS page
- ↑ Yelon D et al. (1999) Restricted expression of cardiac myosin genes reveals regulated aspects of heart tube assembly in zebrafish. Dev Biol 214: 23-37 PubMed GONUTS page
- ↑ 14.0 14.1 Balczerski B et al. (2012) Analysis of sphingosine-1-phosphate signaling mutants reveals endodermal requirements for the growth but not dorsoventral patterning of jaw skeletal precursors. Dev Biol 362: 230-41 PubMed GONUTS page
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