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ZFIN:sema3d

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Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) sema3d
Protein Name(s) semaphorin 3d,
External Links
ZFIN ZDB-GENE-990715-2

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001755

neural crest cell migration

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0004872

receptor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR016201

F

From ZFIN

GO:0005576

extracellular region

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0964

C

From ZFIN

GO:0005576

extracellular region

ZFIN:ZDB-PUB-120306-2

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0243

C

From ZFIN

GO:0007275

multicellular organismal development

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0217

P

From ZFIN

GO:0007275

multicellular organismal development

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR016201

P

From ZFIN

GO:0007399

nervous system development

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0524

P

From ZFIN

GO:0007411

axon guidance

ZFIN:ZDB-PUB-041006-5
PMID:15456815[2]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0007411

axon guidance

ZFIN:ZDB-PUB-070210-30
PMID:17251263[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-050513-5

P

From ZFIN

GO:0007413

axonal fasciculation

ZFIN:ZDB-PUB-041006-5
PMID:15456815[2]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0007422

peripheral nervous system development

ZFIN:ZDB-PUB-051114-10
PMID:16280593[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0007422

peripheral nervous system development

ZFIN:ZDB-PUB-051114-10
PMID:16280593[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0007508

larval heart development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0007508

larval heart development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0010002

cardioblast differentiation

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0010002

cardioblast differentiation

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0014032

neural crest cell development

ZFIN:ZDB-PUB-060921-15
PMID:16971468[5]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0014032

neural crest cell development

ZFIN:ZDB-PUB-060921-15
PMID:16971468[5]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0014032

neural crest cell development

ZFIN:ZDB-PUB-060921-15
PMID:16971468[5]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-061129-1

P

From ZFIN

GO:0014033

neural crest cell differentiation

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0014033

neural crest cell differentiation

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0016020

membrane

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR016201

C

From ZFIN

GO:0021534

cell proliferation in hindbrain

ZFIN:ZDB-PUB-060921-15
PMID:16971468[5]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0021534

cell proliferation in hindbrain

ZFIN:ZDB-PUB-060921-15
PMID:16971468[5]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0030154

cell differentiation

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0221

P

From ZFIN

GO:0030516

regulation of axon extension

ZFIN:ZDB-PUB-051114-10
PMID:16280593[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0030516

regulation of axon extension

ZFIN:ZDB-PUB-051114-10
PMID:16280593[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0031290

retinal ganglion cell axon guidance

ZFIN:ZDB-PUB-060213-1
PMID:16467361[6]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0031290

retinal ganglion cell axon guidance

ZFIN:ZDB-PUB-060213-1
PMID:16467361[6]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0031290

retinal ganglion cell axon guidance

ZFIN:ZDB-PUB-060327-1
PMID:14724229[7]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0031290

retinal ganglion cell axon guidance

ZFIN:ZDB-PUB-060327-1
PMID:14724229[7]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0035050

embryonic heart tube development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0035050

embryonic heart tube development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0048538

thymus development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0048538

thymus development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0048936

peripheral nervous system neuron axonogenesis

ZFIN:ZDB-PUB-101201-20
PMID:21108318[8]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-051128-3
ZFIN:ZDB-MRPHLNO-110107-1

P

From ZFIN

GO:0048936

peripheral nervous system neuron axonogenesis

ZFIN:ZDB-PUB-101201-20
PMID:21108318[8]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0051216

cartilage development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0051216

cartilage development

ZFIN:ZDB-PUB-060731-6
PMID:16860789[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN

GO:0051726

regulation of cell cycle

ZFIN:ZDB-PUB-060921-15
PMID:16971468[5]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-3

P

From ZFIN

GO:0051726

regulation of cell cycle

ZFIN:ZDB-PUB-060921-15
PMID:16971468[5]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051128-4

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 Sato M et al. (2006) Semaphorin3D regulates invasion of cardiac neural crest cells into the primary heart field. Dev Biol 298: 12-21 PubMed GONUTS page
  2. 2.0 2.1 Wolman MA et al. (2004) Repulsion and attraction of axons by semaphorin3D are mediated by different neuropilins in vivo. J Neurosci 24: 8428-35 PubMed GONUTS page
  3. Kuan YS et al. (2007) Neuropilin asymmetry mediates a left-right difference in habenular connectivity. Development 134: 857-65 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 Liu Y & Halloran MC (2005) Central and peripheral axon branches from one neuron are guided differentially by Semaphorin3D and transient axonal glycoprotein-1. J Neurosci 25: 10556-63 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 Berndt JD & Halloran MC (2006) Semaphorin 3d promotes cell proliferation and neural crest cell development downstream of TCF in the zebrafish hindbrain. Development 133: 3983-92 PubMed GONUTS page
  6. 6.0 6.1 Sakai JA & Halloran MC (2006) Semaphorin 3d guides laterality of retinal ganglion cell projections in zebrafish. Development 133: 1035-44 PubMed GONUTS page
  7. 7.0 7.1 Liu Y et al. (2004) Semaphorin3D guides retinal axons along the dorsoventral axis of the tectum. J Neurosci 24: 310-8 PubMed GONUTS page
  8. 8.0 8.1 Tanaka H et al. (2011) Islet1 selectively promotes peripheral axon outgrowth in Rohon-Beard primary sensory neurons. Dev Dyn 240: 9-22 PubMed GONUTS page
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