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ZFIN:pax6a

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Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) pax6a
Protein Name(s) paired box gene 6a,
External Links
ZFIN ZDB-GENE-990415-200

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001071

nucleic acid binding transcription factor activity

ZFIN:ZDB-PUB-080306-6
PMID:18282108[1]

IDA: Inferred from Direct Assay

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0371

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001523

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR009057

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

F

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR017970

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-120306-2

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-120306-4

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

From ZFIN

GO:0006351

transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

From ZFIN

GO:0006351

transcription, DNA-dependent

ZFIN:ZDB-PUB-080306-6
PMID:18282108[1]

IDA: Inferred from Direct Assay

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001523

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR017970

P

From ZFIN

GO:0007275

multicellular organismal development

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0217

P

From ZFIN

GO:0009952

anterior/posterior pattern specification

ZFIN:ZDB-PUB-061020-4
PMID:17010333[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-041116-1

P

From ZFIN

GO:0030900

forebrain development

ZFIN:ZDB-PUB-040205-5
PMID:12917294[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENE-980526-167
ZFIN:ZDB-GENE-980526-40

P

From ZFIN

GO:0030902

hindbrain development

ZFIN:ZDB-PUB-061020-4
PMID:17010333[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-041116-1

P

From ZFIN

GO:0043565

sequence-specific DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

F

From ZFIN

GO:0043565

sequence-specific DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR017970

F

From ZFIN

GO:2001141

regulation of RNA biosynthetic process

ZFIN:ZDB-PUB-080306-6
PMID:18282108[1]

IDA: Inferred from Direct Assay

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 Kleinjan DA et al. (2008) Subfunctionalization of duplicated zebrafish pax6 genes by cis-regulatory divergence. PLoS Genet 4: e29 PubMed GONUTS page
  2. 2.0 2.1 Nolte C et al. (2006) Stereospecificity and PAX6 function direct Hoxd4 neural enhancer activity along the antero-posterior axis. Dev Biol 299: 582-93 PubMed GONUTS page
  3. Scholpp S et al. (2003) Engrailed and Fgf8 act synergistically to maintain the boundary between diencephalon and mesencephalon. Development 130: 4881-93 PubMed GONUTS page
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