Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

ZFIN:ofd1

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) ofd1
Protein Name(s) oral-facial-digital syndrome 1,
External Links
ZFIN ZDB-GENE-030131-5427

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005634

nucleus

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IDA: Inferred from Direct Assay

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-120306-2

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

From ZFIN

GO:0005737

cytoplasm

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

From ZFIN

GO:0005813

centrosome

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IDA: Inferred from Direct Assay

C

From ZFIN

GO:0005814

centriole

ZFIN:ZDB-PUB-120306-2

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0046

C

From ZFIN

GO:0005856

cytoskeleton

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0206

C

From ZFIN

GO:0005929

cilium

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0969

C

From ZFIN

GO:0005932

microtubule basal body

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IDA: Inferred from Direct Assay

C

From ZFIN

GO:0005932

microtubule basal body

ZFIN:ZDB-PUB-120306-2

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0087

C

From ZFIN

GO:0030030

cell projection organization

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0970

P

From ZFIN

GO:0042995

cell projection

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0966

C

From ZFIN

GO:0060027

convergent extension involved in gastrulation

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-070305-2
ZFIN:ZDB-MRPHLNO-090312-2

P

From ZFIN

GO:0060027

convergent extension involved in gastrulation

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-041217-10
ZFIN:ZDB-MRPHLNO-090312-2

P

From ZFIN

GO:0060027

convergent extension involved in gastrulation

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-041217-5
ZFIN:ZDB-MRPHLNO-090312-2

P

From ZFIN

GO:0060027

convergent extension involved in gastrulation

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090312-2

P

From ZFIN

GO:0060027

convergent extension involved in gastrulation

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090407-1

P

From ZFIN

GO:0060027

convergent extension involved in gastrulation

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090407-2

P

From ZFIN

GO:0060287

epithelial cilium movement involved in determination of left/right asymmetry

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090312-2

P

From ZFIN

GO:0060287

epithelial cilium movement involved in determination of left/right asymmetry

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090407-1

P

From ZFIN

GO:0060287

epithelial cilium movement involved in determination of left/right asymmetry

ZFIN:ZDB-PUB-081031-7
PMID:18971206[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090407-2

P

From ZFIN

GO:0061371

determination of heart left/right asymmetry

ZFIN:ZDB-PUB-110131-25
PMID:21266464[2]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-060208-1
ZFIN:ZDB-MRPHLNO-090312-2

P

From ZFIN

GO:0061371

determination of heart left/right asymmetry

ZFIN:ZDB-PUB-110131-25
PMID:21266464[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090312-2

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 Ferrante MI et al. (2009) Convergent extension movements and ciliary function are mediated by ofd1, a zebrafish orthologue of the human oral-facial-digital type 1 syndrome gene. Hum Mol Genet 18: 289-303 PubMed GONUTS page
  2. 2.0 2.1 Lopes CA et al. (2011) Centriolar satellites are assembly points for proteins implicated in human ciliopathies, including oral-facial-digital syndrome 1. J Cell Sci 124: 600-12 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox