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ZFIN:ntla

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Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) ntla
Protein Name(s) no tail a,
External Links
ZFIN ZDB-GENE-980526-437

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001756

somitogenesis

ZFIN:ZDB-PUB-070827-28
PMID:17717538[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-071130-1

P

From ZFIN

GO:0001947

heart looping

ZFIN:ZDB-PUB-971203-9
PMID:9334285[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-1335

P

From ZFIN

GO:0003140

determination of left/right asymmetry in lateral mesoderm

ZFIN:ZDB-PUB-030425-22
PMID:12702646[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970730-2

P

From ZFIN

GO:0003143

embryonic heart tube morphogenesis

ZFIN:ZDB-PUB-971203-9
PMID:9334285[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-1335

P

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-090123-16
PMID:19158186[4]

IDA: Inferred from Direct Assay

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001699

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR002070

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR008967

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR018186

F

From ZFIN

GO:0005515

protein binding

ZFIN:ZDB-PUB-041216-3
PMID:15590746[5]

IPI: Inferred from Physical Interaction

UniProtKB:O42606

F

From ZFIN

GO:0005515

protein binding

ZFIN:ZDB-PUB-041216-3
PMID:15590746[5]

IPI: Inferred from Physical Interaction

UniProtKB:P79734

F

From ZFIN

GO:0005515

protein binding

ZFIN:ZDB-PUB-041216-3
PMID:15590746[5]

IPI: Inferred from Physical Interaction

UniProtKB:Q90467

F

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001699

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR002070

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR018186

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-090417-12
PMID:19369398[6]

IDA: Inferred from Direct Assay

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-961014-1008
PMID:1295726[7]

IDA: Inferred from Direct Assay

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-961014-1010
PMID:7600949[8]

IDA: Inferred from Direct Assay

C

From ZFIN

GO:0006351

transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001699

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR002070

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR008967

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR018186

P

From ZFIN

GO:0007275

multicellular organismal development

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0217

P

From ZFIN

GO:0007368

determination of left/right symmetry

ZFIN:ZDB-PUB-000824-14
PMID:10903181[9]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970731-32

P

From ZFIN

GO:0007368

determination of left/right symmetry

ZFIN:ZDB-PUB-001213-6
PMID:11144351[10]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970730-2

P

From ZFIN

GO:0007368

determination of left/right symmetry

ZFIN:ZDB-PUB-030206-1
PMID:12571098[11]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970730-2

P

From ZFIN

GO:0007368

determination of left/right symmetry

ZFIN:ZDB-PUB-030325-1
PMID:12645931[12]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0007368

determination of left/right symmetry

ZFIN:ZDB-PUB-050209-9
PMID:15694307[13]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-050221-3

P

From ZFIN

GO:0007368

determination of left/right symmetry

ZFIN:ZDB-PUB-971203-9
PMID:9334285[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-1335

P

From ZFIN

GO:0007498

mesoderm development

ZFIN:ZDB-PUB-050920-4
PMID:16162652[14]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-970731-32
ZFIN:ZDB-MRPHLNO-051107-1
ZFIN:ZDB-MRPHLNO-051107-2

P

From ZFIN

GO:0007498

mesoderm development

ZFIN:ZDB-PUB-961014-1010
PMID:7600949[8]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970730-2
ZFIN:ZDB-GENO-970731-32

P

From ZFIN

GO:0010159

specification of organ position

ZFIN:ZDB-PUB-000824-14
PMID:10903181[9]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970731-32

P

From ZFIN

GO:0016055

Wnt receptor signaling pathway

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0879

P

From ZFIN

GO:0030903

notochord development

ZFIN:ZDB-PUB-070827-28
PMID:17717538[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-071130-1

P

From ZFIN

GO:0035121

tail morphogenesis

ZFIN:ZDB-PUB-070827-28
PMID:17717538[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-1335

P

From ZFIN

GO:0035121

tail morphogenesis

ZFIN:ZDB-PUB-070827-28
PMID:17717538[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-071130-1

P

From ZFIN

GO:0044212

transcription regulatory region DNA binding

ZFIN:ZDB-PUB-090123-16
PMID:19158186[4]

IDA: Inferred from Direct Assay

F

From ZFIN

GO:0060028

convergent extension involved in axis elongation

ZFIN:ZDB-PUB-080309-1
PMID:14660439[15]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-080512-4

P

From ZFIN

GO:0060028

convergent extension involved in axis elongation

ZFIN:ZDB-PUB-080309-1
PMID:14660439[15]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-080512-6

P

From ZFIN

GO:0060034

notochord cell differentiation

ZFIN:ZDB-PUB-961014-748
PMID:8681803[16]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970730-2

P

From ZFIN

GO:0061371

determination of heart left/right asymmetry

ZFIN:ZDB-PUB-961014-198
PMID:8660880[17]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-970730-2

P

From ZFIN

GO:2000223

regulation of BMP signaling pathway involved in heart jogging

ZFIN:ZDB-PUB-971203-9
PMID:9334285[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-1335

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 1.3 Shestopalov IA et al. (2007) Light-controlled gene silencing in zebrafish embryos. Nat Chem Biol 3: 650-1 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Chen JN et al. (1997) Left-right pattern of cardiac BMP4 may drive asymmetry of the heart in zebrafish. Development 124: 4373-82 PubMed GONUTS page
  3. Long S et al. (2003) The zebrafish nodal-related gene southpaw is required for visceral and diencephalic left-right asymmetry. Development 130: 2303-16 PubMed GONUTS page
  4. 4.0 4.1 Garnett AT et al. (2009) Identification of direct T-box target genes in the developing zebrafish mesoderm. Development 136: 749-60 PubMed GONUTS page
  5. 5.0 5.1 5.2 Ninkovic J et al. (2005) Inhibition of neurogenesis at the zebrafish midbrain-hindbrain boundary by the combined and dose-dependent activity of a new hairy/E(spl) gene pair. Development 132: 75-88 PubMed GONUTS page
  6. Dixon Fox M & Bruce AE (2009) Short- and long-range functions of Goosecoid in zebrafish axis formation are independent of Chordin, Noggin 1 and Follistatin-like 1b. Development 136: 1675-85 PubMed GONUTS page
  7. Schulte-Merker S et al. (1992) The protein product of the zebrafish homologue of the mouse T gene is expressed in nuclei of the germ ring and the notochord of the early embryo. Development 116: 1021-32 PubMed GONUTS page
  8. 8.0 8.1 Schulte-Merker S et al. (1994) no tail (ntl) is the zebrafish homologue of the mouse T (Brachyury) gene. Development 120: 1009-15 PubMed GONUTS page
  9. 9.0 9.1 Bisgrove BW et al. (2000) Multiple pathways in the midline regulate concordant brain, heart and gut left-right asymmetry. Development 127: 3567-79 PubMed GONUTS page
  10. Concha ML et al. (2000) A nodal signaling pathway regulates the laterality of neuroanatomical asymmetries in the zebrafish forebrain. Neuron 28: 399-409 PubMed GONUTS page
  11. Gamse JT et al. (2003) The parapineal mediates left-right asymmetry in the zebrafish diencephalon. Development 130: 1059-68 PubMed GONUTS page
  12. Field HA et al. (2003) Formation of the digestive system in zebrafish. I. Liver morphogenesis. Dev Biol 253: 279-90 PubMed GONUTS page
  13. Aizawa H et al. (2005) Laterotopic representation of left-right information onto the dorso-ventral axis of a zebrafish midbrain target nucleus. Curr Biol 15: 238-43 PubMed GONUTS page
  14. Honjo Y & Eisen JS (2005) Slow muscle regulates the pattern of trunk neural crest migration in zebrafish. Development 132: 4461-70 PubMed GONUTS page
  15. 15.0 15.1 Marlow F et al. (2004) No tail co-operates with non-canonical Wnt signaling to regulate posterior body morphogenesis in zebrafish. Development 131: 203-16 PubMed GONUTS page
  16. Melby AE et al. (1996) Specification of cell fates at the dorsal margin of the zebrafish gastrula. Development 122: 2225-37 PubMed GONUTS page
  17. Danos MC & Yost HJ (1996) Role of notochord in specification of cardiac left-right orientation in zebrafish and Xenopus. Dev Biol 177: 96-103 PubMed GONUTS page
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