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ZFIN:foxj1b

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Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) foxj1b
Protein Name(s) forkhead box J1b,
External Links
ZFIN ZDB-GENE-041212-76

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001947

heart looping

ZFIN:ZDB-PUB-090319-5
PMID:19284996[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090513-3

P

From ZFIN

GO:0002635

negative regulation of germinal center formation

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0002897

positive regulation of central B cell tolerance induction

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0002924

negative regulation of humoral immune response mediated by circulating immunoglobulin

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

From ZFIN

GO:0003690

double-stranded DNA binding

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN0

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001766

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR018122

F

From ZFIN

GO:0003705

RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN0

F

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

From ZFIN

GO:0005667

transcription factor complex

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN0

C

From ZFIN

GO:0006351

transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001766

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR018122

P

From ZFIN

GO:0006357

regulation of transcription from RNA polymerase II promoter

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN0

P

From ZFIN

GO:0007368

determination of left/right symmetry

ZFIN:ZDB-PUB-090319-5
PMID:19284996[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090513-3

P

From ZFIN

GO:0008134

transcription factor binding

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN0

F

From ZFIN

GO:0008301

DNA binding, bending

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN1

F

From ZFIN

GO:0019904

protein domain specific binding

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN224

F

From ZFIN

GO:0030036

actin cytoskeleton organization

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN317

P

From ZFIN

GO:0030324

lung development

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0030855

epithelial cell differentiation

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0032088

negative regulation of NF-kappaB transcription factor activity

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0032862

activation of Rho GTPase activity

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN317

P

From ZFIN

GO:0033085

negative regulation of T cell differentiation in thymus

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0035089

establishment of apical/basal cell polarity

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN317

P

From ZFIN

GO:0042130

negative regulation of T cell proliferation

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0042384

cilium assembly

ZFIN:ZDB-PUB-081121-12
PMID:19011630[2]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0043565

sequence-specific DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001766

F

From ZFIN

GO:0043565

sequence-specific DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR018122

F

From ZFIN

GO:0045409

negative regulation of interleukin-6 biosynthetic process

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0050869

negative regulation of B cell activation

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0050900

leukocyte migration

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN319

P

From ZFIN

GO:0060088

auditory receptor cell stereocilium organization

ZFIN:ZDB-PUB-110110-27
PMID:21205793[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-111118-14

P

From ZFIN

GO:0060088

auditory receptor cell stereocilium organization

ZFIN:ZDB-PUB-110110-27
PMID:21205793[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-101117-4

P

From ZFIN

GO:0060972

left/right pattern formation

ZFIN:ZDB-PUB-110330-1

PANTHER:PTHR11829_AN317

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 Tian T et al. (2009) Both foxj1a and foxj1b are implicated in left-right asymmetric development in zebrafish embryos. Biochem Biophys Res Commun 380: 537-42 PubMed GONUTS page
  2. Yu X et al. (2008) Foxj1 transcription factors are master regulators of the motile ciliogenic program. Nat Genet 40: 1445-53 PubMed GONUTS page
  3. 3.0 3.1 Yu X et al. (2011) Cilia-driven fluid flow as an epigenetic cue for otolith biomineralization on sensory hair cells of the inner ear. Development 138: 487-94 PubMed GONUTS page
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