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ZFIN:cxcl12b

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Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) cxcl12b
Protein Name(s) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1),
External Links
ZFIN ZDB-GENE-030721-1

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000902

cell morphogenesis

ZFIN:ZDB-PUB-080630-12
PMID:18579679[1]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-051028-1
ZFIN:ZDB-MRPHLNO-051028-2

P

From ZFIN

GO:0001570

vasculogenesis

ZFIN:ZDB-PUB-091023-4
PMID:19797767[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051028-1

P

From ZFIN

GO:0001764

neuron migration

ZFIN:ZDB-PUB-050907-3
PMID:16129396[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051028-1

P

From ZFIN

GO:0002040

sprouting angiogenesis

ZFIN:ZDB-PUB-110426-10
PMID:21429983[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-110513-4

P

From ZFIN

GO:0005125

cytokine activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR002473

F

From ZFIN

GO:0005576

extracellular region

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0964

C

From ZFIN

GO:0005576

extracellular region

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001811

C

From ZFIN

GO:0005576

extracellular region

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR002473

C

From ZFIN

GO:0006955

immune response

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001811

P

From ZFIN

GO:0006955

immune response

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR002473

P

From ZFIN

GO:0008009

chemokine activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001811

F

From ZFIN

GO:0031290

retinal ganglion cell axon guidance

ZFIN:ZDB-PUB-070212-16
PMID:17267551[5]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-070412-4
ZFIN:ZDB-MRPHLNO-051028-1

P

From ZFIN

GO:0042056

chemoattractant activity

ZFIN:ZDB-PUB-080630-12
PMID:18579679[1]

IDA: Inferred from Direct Assay

F

From ZFIN

GO:0042074

cell migration involved in gastrulation

ZFIN:ZDB-PUB-080630-12
PMID:18579679[1]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-051028-1
ZFIN:ZDB-MRPHLNO-051028-2

P

From ZFIN

GO:0042074

cell migration involved in gastrulation

ZFIN:ZDB-PUB-080630-12
PMID:18579679[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051028-1

P

From ZFIN

GO:0050930

induction of positive chemotaxis

ZFIN:ZDB-PUB-040415-5
PMID:15081362[6]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENE-030318-1

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 1.3 Mizoguchi T et al. (2008) Sdf1/Cxcr4 signaling controls the dorsal migration of endodermal cells during zebrafish gastrulation. Development 135: 2521-9 PubMed GONUTS page
  2. Siekmann AF et al. (2009) Chemokine signaling guides regional patterning of the first embryonic artery. Genes Dev 23: 2272-7 PubMed GONUTS page
  3. Knaut H et al. (2005) Assembly of trigeminal sensory ganglia by chemokine signaling. Neuron 47: 653-66 PubMed GONUTS page
  4. Bussmann J et al. (2011) Arterial-venous network formation during brain vascularization involves hemodynamic regulation of chemokine signaling. Development 138: 1717-26 PubMed GONUTS page
  5. Chalasani SH et al. (2007) Stromal cell-derived factor-1 antagonizes slit/robo signaling in vivo. J Neurosci 27: 973-80 PubMed GONUTS page
  6. Li Q et al. (2004) Chemokine signaling regulates sensory cell migration in zebrafish. Dev Biol 269: 123-36 PubMed GONUTS page
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