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ZFIN:crx

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Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) crx
Protein Name(s) cone-rod homeobox,
External Links
ZFIN ZDB-GENE-010403-1

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001654

eye development

ZFIN:ZDB-PUB-040415-4
PMID:15081370[1]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0371

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR003025

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR009057

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-050623-6
PMID:15964232[2]

IDA: Inferred from Direct Assay

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR003025

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR013851

F

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR003025

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR013851

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR017970

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-120306-4

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

P

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR017970

P

From ZFIN

GO:0007275

multicellular organismal development

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR003025

P

From ZFIN

GO:0007275

multicellular organismal development

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR013851

P

From ZFIN

GO:0007601

visual perception

ZFIN:ZDB-PUB-100330-16
PMID:20333246[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-060127-3

P

From ZFIN

GO:0030182

neuron differentiation

ZFIN:ZDB-PUB-040415-4
PMID:15081370[1]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0042462

eye photoreceptor cell development

ZFIN:ZDB-PUB-040415-4
PMID:15081370[1]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0043565

sequence-specific DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

F

From ZFIN

GO:0043565

sequence-specific DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR017970

F

From ZFIN

GO:0046671

negative regulation of retinal cell programmed cell death

ZFIN:ZDB-PUB-040415-4
PMID:15081370[1]

IMP: Inferred from Mutant Phenotype

P

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 1.3 Shen YC & Raymond PA (2004) Zebrafish cone-rod (crx) homeobox gene promotes retinogenesis. Dev Biol 269: 237-51 PubMed GONUTS page
  2. Kawamura S et al. (2005) Evolutionarily conserved and divergent regulatory sequences in the fish rod opsin promoter. Comp Biochem Physiol B Biochem Mol Biol 141: 391-9 PubMed GONUTS page
  3. Pretorius PR et al. (2010) Identification and functional analysis of the vision-specific BBS3 (ARL6) long isoform. PLoS Genet 6: e1000884 PubMed GONUTS page
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