The Spring 2012 season of CACAO has started!

ZFIN:bon

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Danio rerio (zebrafish) (taxon:7955)
Gene Name(s) bon
Protein Name(s) bonnie and clyde,
External Links
ZFIN ZDB-GENE-000208-20

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001706

endoderm formation

ZFIN:ZDB-PUB-000616-3
PMID:10817762[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-070301-1

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-000616-3
PMID:10817762[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-100105-5

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-001205-6
PMID:11092818[2]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-110502-3

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-001205-6
PMID:11092818[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-548

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENE-001228-1

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENE-001228-1
ZFIN:ZDB-GENE-980526-340

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENE-001228-1
ZFIN:ZDB-GENE-980526-340
ZFIN:ZDB-MRPHLNO-050818-2

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENE-980526-340

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-051112-1
ZFIN:ZDB-MRPHLNO-051112-3
ZFIN:ZDB-MRPHLNO-051112-4
ZFIN:ZDB-MRPHLNO-051205-3

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-051205-3

P

From ZFIN

GO:0001706

endoderm formation

ZFIN:ZDB-PUB-060508-12
PMID:16672336[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-548

P

From ZFIN

GO:0003007

heart morphogenesis

ZFIN:ZDB-PUB-021105-10
PMID:12397099[5]

IMP: Inferred from Mutant Phenotype

P

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

SP_KW:KW-0238

F

From ZFIN

GO:0003677

DNA binding

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

SP_KW:KW-0371

F

From ZFIN

GO:0003700

sequence-specific DNA binding transcription factor activity

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

F

From ZFIN

GO:0005515

protein binding

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IPI: Inferred from Physical Interaction

UniProtKB:Q9DDU3

F

From ZFIN

GO:0005515

protein binding

ZFIN:ZDB-PUB-051005-5
PMID:16198294[3]

IPI: Inferred from Physical Interaction

UniProtKB:Q9W6U0

F

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-020723-1

IEA: Inferred from Electronic Annotation

SP_KW:KW-0539

C

From ZFIN

GO:0005634

nucleus

ZFIN:ZDB-PUB-110127-3

IEA: Inferred from Electronic Annotation

SP_SL:SL-0191

C

From ZFIN

GO:0006355

regulation of transcription, DNA-dependent

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

P

From ZFIN

GO:0007492

endoderm development

ZFIN:ZDB-PUB-061020-28
PMID:17026981[6]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENE-990415-198
ZFIN:ZDB-GENO-070301-1

P

From ZFIN

GO:0009880

embryonic pattern specification

ZFIN:ZDB-PUB-030805-6
PMID:12889061[7]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-548

P

From ZFIN

GO:0035050

embryonic heart tube development

ZFIN:ZDB-PUB-060508-12
PMID:16672336[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-980202-548

P

From ZFIN

GO:0043565

sequence-specific DNA binding

ZFIN:ZDB-PUB-020724-1

IEA: Inferred from Electronic Annotation

InterPro:IPR001356

F

From ZFIN


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 Kikuchi Y et al. (2000) The zebrafish bonnie and clyde gene encodes a Mix family homeodomain protein that regulates the generation of endodermal precursors. Genes Dev 14: 1279-89 PubMed GONUTS page
  2. 2.0 2.1 Reiter JF et al. (2001) Multiple roles for Gata5 in zebrafish endoderm formation. Development 128: 125-35 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 Bjornson CR et al. (2005) Eomesodermin is a localized maternal determinant required for endoderm induction in zebrafish. Dev Cell 9: 523-33 PubMed GONUTS page
  4. 4.0 4.1 Poulain M et al. (2006) Zebrafish endoderm formation is regulated by combinatorial Nodal, FGF and BMP signalling. Development 133: 2189-200 PubMed GONUTS page
  5. Poulain M & Lepage T (2002) Mezzo, a paired-like homeobox protein is an immediate target of Nodal signalling and regulates endoderm specification in zebrafish. Development 129: 4901-14 PubMed GONUTS page
  6. Mizoguchi T et al. (2006) Fgf signaling negatively regulates Nodal-dependent endoderm induction in zebrafish. Dev Biol 300: 612-22 PubMed GONUTS page
  7. Tallafuss A et al. (2003) Selective control of neuronal cluster size at the forebrain/midbrain boundary by signaling from the prechordal plate. Dev Dyn 227: 524-35 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox