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YEAST:GAL4
Contents |
| Species (Taxon ID) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). ([1]) | |
| Gene Name(s) | GAL4 | |
| Protein Name(s) | Regulatory protein GAL4 | |
| External Links | ||
| EMBL | K01486 Z67751 Z73604 BK006949 | |
| PIR | A05022 | |
| RefSeq | NP_015076.1 | |
| PDB | 1AW6 1D66 1HBW 3BTS 3COQ | |
| PDBsum | 1AW6 1D66 1HBW 3BTS 3COQ | |
| ProteinModelPortal | P04386 | |
| SMR | P04386 | |
| DIP | DIP-593N | |
| STRING | P04386 | |
| PeptideAtlas | P04386 | |
| EnsemblFungi | YPL248C | |
| GeneID | 855828 | |
| KEGG | sce:YPL248C | |
| NMPDR | fig|4932.3.peg.6203 | |
| CYGD | YPL248c | |
| SGD | S000006169 | |
| eggNOG | fuNOG09756 | |
| GeneTree | EFGT00050000000237 | |
| OMA | IYESELT | |
| OrthoDB | EOG4NS6MF | |
| PhylomeDB | P04386 | |
| NextBio | 980383 | |
| ArrayExpress | P04386 | |
| Genevestigator | P04386 | |
| GermOnline | YPL248C | |
| GO | GO:0005634 GO:0000978 GO:0001077 GO:0001085 GO:0001133 GO:0008270 GO:0006012 GO:0000435 | |
| InterPro | IPR005600 IPR007219 IPR001138 | |
| Gene3D | G3DSA:4.10.240.10 | |
| Pfam | PF04082 PF03902 PF00172 | |
| SMART | SM00906 SM00066 | |
| SUPFAM | SSF57701 | |
| PROSITE | PS00463 PS50048 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000435 |
positive regulation of transcription from RNA polymerase II promoter by galactose |
IDA: Inferred from Direct Assay |
|
P |
Seeded From UniProt |
|||
| GO:0000435 |
positive regulation of transcription from RNA polymerase II promoter by galactose |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0000978 |
RNA polymerase II core promoter proximal region sequence-specific DNA binding |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0001077 |
RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0001085 |
RNA polymerase II transcription factor binding |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0001085 |
RNA polymerase II transcription factor binding |
IPI: Inferred from Physical Interaction |
SGD:S000001141 |
F |
Seeded From UniProt |
|||
| GO:0001133 |
sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity |
IGI: Inferred from Genetic Interaction |
SGD:S000001141 |
F |
Seeded From UniProt |
|||
| GO:0001133 |
sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity |
IMP: Inferred from Mutant Phenotype |
|
F |
Seeded From UniProt |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-0191 |
C |
Seeded From UniProt |
|||
| GO:0005634 |
nucleus |
IDA: Inferred from Direct Assay |
|
C |
Seeded From UniProt |
|||
| GO:0005975 |
carbohydrate metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006012 |
galactose metabolic process |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006012 |
galactose metabolic process |
IMP: Inferred from Mutant Phenotype |
|
P |
Seeded From UniProt |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0008270 |
zinc ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0008270 |
zinc ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0043565 |
sequence-specific DNA binding |
IDA: Inferred from Direct Assay |
|
F |
Seeded From UniProt |
|||
| GO:0046872 |
metal ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
| |||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Giniger E et al. (1985) Specific DNA binding of GAL4, a positive regulatory protein of yeast. Cell 40: 767-74 PubMed GONUTS page
- ↑ 2.0 2.1 Hashimoto H et al. (1983) Regulation of expression of the galactose gene cluster in Saccharomyces cerevisiae. Isolation and characterization of the regulatory gene GAL4. Mol Gen Genet 191: 31-8 PubMed GONUTS page
- ↑ Keegan L et al. (1986) Separation of DNA binding from the transcription-activating function of a eukaryotic regulatory protein. Science 231: 699-704 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Bhaumik SR et al. (2004) In vivo target of a transcriptional activator revealed by fluorescence resonance energy transfer. Genes Dev 18: 333-43 PubMed GONUTS page
- ↑ Silver PA et al. (1984) Amino terminus of the yeast GAL4 gene product is sufficient for nuclear localization. Proc Natl Acad Sci U S A 81: 5951-5 PubMed GONUTS page
- ↑ Zhu C et al. (2009) High-resolution DNA-binding specificity analysis of yeast transcription factors. Genome Res 19: 556-66 PubMed GONUTS page
