Ambox notice.png

GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.

You can help reduce stress on the server by:

  1. not reloading pages frequently - this just adds
  2. opening links in new windows (so you can read the old page)

WB:trim-9

From GONUTS
Jump to: navigation, search

Contents

Species (Taxon ID) Caenorhabditis elegans (nematode) (taxon:6239)
Gene Name(s) trim-9 ( synonyms: rax-1, C39F7.2 )
Protein Name(s) No Information Provided.
External Links
WB WBGene00016539

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005102

receptor binding

WB_REF:WBPaper00036484
PMID:20627077[1]

IPI: Inferred from Physical Interaction

WB:WBGene00006776

F

From WB

GO:0005102

receptor binding

WB_REF:WBPaper00036485
PMID:20627078[2]

IPI: Inferred from Physical Interaction

WB:WBGene00006776

F

From WB

GO:0005515

protein binding

WB_REF:WBPaper00036485
PMID:20627078[2]

IPI: Inferred from Physical Interaction

WB:WBGene00006805

F

From WB

GO:0005622

intracellular

PMID:12520011[3]
PMID:12654719[4]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR000315

C

From WB

GO:0005622

intracellular

PMID:12520011[3]
PMID:12654719[4]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR003649

C

From WB

GO:0008270

zinc ion binding

PMID:12520011[3]
PMID:12654719[4]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR000315

F

From WB

GO:0008270

zinc ion binding

PMID:12520011[3]
PMID:12654719[4]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001841

F

From WB

GO:0008340

determination of adult lifespan

WB_REF:WBPaper00026643
PMID:15998808[5]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00065292
WB:WBPhenotype:0000061

P

From WB

GO:0030031

cell projection assembly

WB_REF:WBPaper00036485
PMID:20627078[2]

IMP: Inferred from Mutant Phenotype

WB:WBVar00278516

P

From WB

GO:0031175

neuron projection development

WB_REF:WBPaper00036484
PMID:20627077[1]

IMP: Inferred from Mutant Phenotype

WB:WBVar00278524
WB:WBVar00278525
WB:WBVar00278526

P

From WB

GO:0031252

cell leading edge

WB_REF:WBPaper00036485
PMID:20627078[2]

IDA: Inferred from Direct Assay

C

From WB

GO:0033563

dorsal/ventral axon guidance

WB_REF:WBPaper00036484
PMID:20627077[1]

IMP: Inferred from Mutant Phenotype

WB:WBVar00278524
WB:WBVar00278525
WB:WBVar00278526

P

From WB

GO:0033563

dorsal/ventral axon guidance

WB_REF:WBPaper00036485
PMID:20627078[2]

IMP: Inferred from Mutant Phenotype

WB:WBVar00278516

P

From WB

GO:0042803

protein homodimerization activity

WB_REF:WBPaper00036485
PMID:20627078[2]

IPI: Inferred from Physical Interaction

WB:WBGene00016539

F

From WB

GO:0043005

neuron projection

WB_REF:WBPaper00036484
PMID:20627077[1]

IDA: Inferred from Direct Assay

C

From WB

GO:0043025

neuronal cell body

WB_REF:WBPaper00036484
PMID:20627077[1]

IDA: Inferred from Direct Assay

C

From WB

GO:0055120

striated muscle dense body

WB_REF:WBPaper00036485
PMID:20627078[2]

IDA: Inferred from Direct Assay

C

From WB


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 1.3 1.4 Hao JC et al. (2010) The tripartite motif protein MADD-2 functions with the receptor UNC-40 (DCC) in Netrin-mediated axon attraction and branching. Dev Cell 18: 950-60 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Alexander M et al. (2010) MADD-2, a homolog of the Opitz syndrome protein MID1, regulates guidance to the midline through UNC-40 in Caenorhabditis elegans. Dev Cell 18: 961-72 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
  5. Hamilton B et al. (2005) A systematic RNAi screen for longevity genes in C. elegans. Genes Dev 19: 1544-55 PubMed GONUTS page
Personal tools
Namespaces
Variants
Actions
Navigation
Cacao
Journal Clubs
page contributors
Toolbox