GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.
You can help reduce stress on the server by:
- not reloading pages frequently - this just adds
- opening links in new windows (so you can read the old page)
WB:pal-1
Contents |
| Species (Taxon ID) | Caenorhabditis elegans (nematode) (taxon:6239) | |
| Gene Name(s) | pal-1 ( synonyms: nob-2, C38D4.6 ) | |
| Protein Name(s) | No Information Provided. | |
| External Links | ||
| WB | WBGene00003912 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000794 |
condensed nuclear chromosome |
WB_REF:WBPaper00002573 |
IDA: Inferred from Direct Assay |
C |
From WB |
|||
| GO:0001712 |
ectodermal cell fate commitment |
WB_REF:WBPaper00002573 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00054602 |
P |
From WB |
||
| GO:0003700 |
sequence-specific DNA binding transcription factor activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001356 |
F |
From WB |
|||
| GO:0003705 |
RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity |
WB_REF:WBPaper00032967 |
IDA: Inferred from Direct Assay |
F |
From WB |
|||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR017970 |
C |
From WB |
|||
| GO:0005634 |
nucleus |
WB_REF:WBPaper00002573 |
IDA: Inferred from Direct Assay |
C |
From WB |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001356 |
P |
From WB |
|||
| GO:0006355 |
regulation of transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR017970 |
P |
From WB |
|||
| GO:0009790 |
embryo development |
WB_REF:WBPaper00002573 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00054602 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00004403 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00002523 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00004509 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00077273 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00004509 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00077287 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00005654 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00008503 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00006395 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00024779 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00025054 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00042160 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00025054 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00042161 |
P |
From WB |
||
| GO:0009880 |
embryonic pattern specification |
WB_REF:WBPaper00002573 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00054602 |
P |
From WB |
||
| GO:0010467 |
gene expression |
WB_REF:WBPaper00032967 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00078101 |
P |
From WB |
||
| GO:0042693 |
muscle cell fate commitment |
WB_REF:WBPaper00002573 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00054602 |
P |
From WB |
||
| GO:0043565 |
sequence-specific DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR001356 |
F |
From WB |
|||
| GO:0043565 |
sequence-specific DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR017970 |
F |
From WB |
|||
| GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
WB_REF:WBPaper00002573 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00054602 |
P |
From WB |
||
| GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
WB_REF:WBPaper00032967 |
IDA: Inferred from Direct Assay |
P |
From WB |
|||
| GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
WB_REF:WBPaper00032967 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
| ||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Hunter CP & Kenyon C (1996) Spatial and temporal controls target pal-1 blastomere-specification activity to a single blastomere lineage in C. elegans embryos. Cell 87: 217-26 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Lei H et al. (2009) Caudal-like PAL-1 directly activates the bodywall muscle module regulator hlh-1 in C. elegans to initiate the embryonic muscle gene regulatory network. Development 136: 1241-9 PubMed GONUTS page
- ↑ Gönczy P et al. (2000) Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III. Nature 408: 331-6 PubMed GONUTS page
- ↑ 6.0 6.1 Kamath RS et al. (2001) Effectiveness of specific RNA-mediated interference through ingested double-stranded RNA in Caenorhabditis elegans. Genome Biol 2: RESEARCH0002 PubMed GONUTS page
- ↑ Kamath RS et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-7 PubMed GONUTS page
- ↑ Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page
- ↑ 9.0 9.1 Sönnichsen B et al. (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-9 PubMed GONUTS page
