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WB:nid-1

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Contents

Species (Taxon ID) Caenorhabditis elegans (nematode) (taxon:6239)
Gene Name(s) nid-1 ( synonyms: F54F3.1 )
Protein Name(s) No Information Provided.
External Links
WB WBGene00003738

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001764

neuron migration

WB_REF:WBPaper00003979
PMID:10753123[1]

IMP: Inferred from Mutant Phenotype

WB:WBVar00274915

P

From WB

GO:0005201

extracellular matrix structural constituent

WB_REF:WBPaper00003979
PMID:10753123[1]

IDA: Inferred from Direct Assay

F

From WB

GO:0005509

calcium ion binding

PMID:12520011[2]
PMID:12654719[3]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR001881

F

From WB

GO:0005509

calcium ion binding

PMID:12520011[2]
PMID:12654719[3]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR018097

F

From WB

GO:0005604

basement membrane

WB_REF:WBPaper00003979
PMID:10753123[1]

IDA: Inferred from Direct Assay

C

From WB

GO:0007160

cell-matrix adhesion

PMID:12520011[2]
PMID:12654719[3]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR003886

P

From WB

GO:0007271

synaptic transmission, cholinergic

WB_REF:WBPaper00005871
PMID:12736328[4]

IMP: Inferred from Mutant Phenotype

WB:WBVar00054142
WB:WBVar00054147

P

From WB

GO:0016021

integral to membrane

PMID:12520011[2]
PMID:12654719[3]

IEA: Inferred from Electronic Annotation

CBS:TMHMM

C

From WB

GO:0035418

protein localization to synapse

WB_REF:WBPaper00005871
PMID:12736328[4]

IMP: Inferred from Mutant Phenotype

WB:WBVar00054142
WB:WBVar00054147

P

From WB

GO:0045178

basal part of cell

WB_REF:WBPaper00004414
PMID:11071916[5]

IDA: Inferred from Direct Assay

C

From WB

GO:0050808

synapse organization

WB_REF:WBPaper00005871
PMID:12736328[4]

IMP: Inferred from Mutant Phenotype

WB:WBVar00054142
WB:WBVar00054147

P

From WB


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 Kim S & Wadsworth WG (2000) Positioning of longitudinal nerves in C. elegans by nidogen. Science 288: 150-4 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
  4. 4.0 4.1 4.2 Ackley BD et al. (2003) The basement membrane components nidogen and type XVIII collagen regulate organization of neuromuscular junctions in Caenorhabditis elegans. J Neurosci 23: 3577-87 PubMed GONUTS page
  5. Kang SH & Kramer JM (2000) Nidogen is nonessential and not required for normal type IV collagen localization in Caenorhabditis elegans. Mol Biol Cell 11: 3911-23 PubMed GONUTS page
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