WB:lin-3

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Annotations

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes
	GO:0000003	reproduction	WB_REF:WBPaper00006395 PMID:14551910^[1]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00025408 WB:WBPhenotype:0000689	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00006395 PMID:14551910^[1]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00025409 WB:WBPhenotype:0000689	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00006395 PMID:14551910^[1]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00027321 WB:WBPhenotype:0001037	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00024925 PMID:15687288^[2]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00061463 WB:WBPhenotype:0000689	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00025054 PMID:15791247^[3]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00046517 WB:WBPhenotype:0000689	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027135 PMID:16507136^[4]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00068451 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027135 PMID:16507136^[4]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00068452 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027135 PMID:16507136^[4]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00068453 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027135 PMID:16507136^[4]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00068454 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027135 PMID:16507136^[4]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00068455 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027756 PMID:16845399^[5]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00064503 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027756 PMID:16845399^[5]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00064583 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00027756 PMID:16845399^[5]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00064635 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00072467 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074292 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074293 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074294 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074295 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074296 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074297 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074298 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074299 WB:WBPhenotype:0000688	P	From WB
	GO:0000003	reproduction	WB_REF:WBPaper00038381 PMID:21529718^[7]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00085569 WB:WBPhenotype:0000688	P	From WB
	GO:0002119	nematode larval development	WB_REF:WBPaper00000762 PMID:3996896^[8]	IMP: Inferred from Mutant Phenotype		P	From WB
	GO:0005154	epidermal growth factor receptor binding	WB_REF:WBPaper00001573 PMID:1641037^[9]	ISS: Inferred from Sequence or Structural Similarity	UniProtKB:P01135	F	From WB
	GO:0005615	extracellular space	WB_REF:WBPaper00001573 PMID:1641037^[9]	ISS: Inferred from Sequence or Structural Similarity	UniProtKB:P01135	C	From WB
	GO:0005887	integral to plasma membrane	WB_REF:WBPaper00001573 PMID:1641037^[9]	ISS: Inferred from Sequence or Structural Similarity	UniProtKB:P01135	C	From WB
	GO:0007173	epidermal growth factor receptor signaling pathway	WB_REF:WBPaper00001573 PMID:1641037^[9]	IGI: Inferred from Genetic Interaction	WB:WBGene00002299	P	From WB
	GO:0007173	epidermal growth factor receptor signaling pathway	WB_REF:WBPaper00001573 PMID:1641037^[9]	ISS: Inferred from Sequence or Structural Similarity	Uniprot:P01133	P	From WB
	GO:0009791	post-embryonic development	WB_REF:WBPaper00000496 PMID:7262539^[10]	IMP: Inferred from Mutant Phenotype	WB:WBVar00143992	P	From WB
	GO:0016021	integral to membrane	PMID:12520011^[11] PMID:12654719^[12]	IEA: Inferred from Electronic Annotation	CBS:TMHMM	C	From WB
	GO:0018991	oviposition	WB_REF:WBPaper00000496 PMID:7262539^[10]	IMP: Inferred from Mutant Phenotype	WB:WBVar00143992	P	From WB
	GO:0018991	oviposition	WB_REF:WBPaper00001573 PMID:1641037^[9]	IMP: Inferred from Mutant Phenotype	WB:WBVar00089466 WB:WBVar00248903	P	From WB
	GO:0018991	oviposition	WB_REF:WBPaper00024497 PMID:15489339^[13]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00030244 WB:WBPhenotype:0000640	P	From WB
	GO:0018991	oviposition	WB_REF:WBPaper00024876 PMID:15455032^[14]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00062583 WB:WBPhenotype:0000640	P	From WB
	GO:0018991	oviposition	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00072468 WB:WBPhenotype:0000640	P	From WB
	GO:0018991	oviposition	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00072469 WB:WBPhenotype:0000640	P	From WB
	GO:0030539	male genitalia development	WB_REF:WBPaper00002043 PMID:7607066^[15]	IMP: Inferred from Mutant Phenotype		P	From WB
	GO:0030728	ovulation	WB_REF:WBPaper00003017 PMID:9491893^[16]	IMP: Inferred from Mutant Phenotype		P	From WB
	GO:0031129	inductive cell-cell signaling	WB_REF:WBPaper00001573 PMID:1641037^[9]	IEP: Inferred from Expression Pattern		P	From WB
	GO:0031129	inductive cell-cell signaling	WB_REF:WBPaper00001573 PMID:1641037^[9]	IMP: Inferred from Mutant Phenotype		P	From WB
	GO:0040011	locomotion	WB_REF:WBPaper00027214 PMID:16600994^[17]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00078383 WB:WBPhenotype:0000643	P	From WB
	GO:0040015	negative regulation of multicellular organism growth	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074297 WB:WBPhenotype:0000022	P	From WB
	GO:0040015	negative regulation of multicellular organism growth	WB_REF:WBPaper00029258 PMID:17417969^[6]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00074298 WB:WBPhenotype:0000022	P	From WB
	GO:0040026	positive regulation of vulval development	WB_REF:WBPaper00000496 PMID:7262539^[10]	IMP: Inferred from Mutant Phenotype	WB:WBVar00143992	P	From WB
	GO:0040026	positive regulation of vulval development	WB_REF:WBPaper00000762 PMID:3996896^[8]	IMP: Inferred from Mutant Phenotype	WB:WBVar00143992	P	From WB
	GO:0040026	positive regulation of vulval development	WB_REF:WBPaper00001573 PMID:1641037^[9]	IMP: Inferred from Mutant Phenotype	WB:WBVar00089466 WB:WBVar00248903	P	From WB
	GO:0040027	negative regulation of vulval development	WB_REF:WBPaper00024876 PMID:15455032^[14]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00062584 WB:WBPhenotype:0000700	P	From WB
	GO:0040027	negative regulation of vulval development	WB_REF:WBPaper00027025 PMID:16407099^[18]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00064345 WB:WBPhenotype:0000700	P	From WB
	GO:0040027	negative regulation of vulval development	WB_REF:WBPaper00027025 PMID:16407099^[18]	IMP: Inferred from Mutant Phenotype	WB:WBRNAi00064346 WB:WBPhenotype:0000700	P	From WB
	GO:0042659	regulation of cell fate specification	WB_REF:WBPaper00003007 PMID:9486792^[19]	IMP: Inferred from Mutant Phenotype	WB:WBVar00089466	P	From WB
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page
↑ Fernandez AG et al. (2005) New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones. Genome Res 15: 250-9 PubMed GONUTS page
↑ Sönnichsen B et al. (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-9 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 Lehner B et al. (2006) Loss of LIN-35, the Caenorhabditis elegans ortholog of the tumor suppressor p105Rb, results in enhanced RNA interference. Genome Biol 7: R4 PubMed GONUTS page
↑ ^5.0 ^5.1 ^5.2 Lehner B et al. (2006) Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways. Nat Genet 38: 896-903 PubMed GONUTS page
↑ ^6.00 ^6.01 ^6.02 ^6.03 ^6.04 ^6.05 ^6.06 ^6.07 ^6.08 ^6.09 ^6.10 ^6.11 ^6.12 Ceron J et al. (2007) Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. BMC Dev Biol 7: 30 PubMed GONUTS page
↑ Green RA et al. (2011) A high-resolution C. elegans essential gene network based on phenotypic profiling of a complex tissue. Cell 145: 470-82 PubMed GONUTS page
↑ ^8.0 ^8.1 Ferguson EL & Horvitz HR (1985) Identification and characterization of 22 genes that affect the vulval cell lineages of the nematode Caenorhabditis elegans. Genetics 110: 17-72 PubMed GONUTS page
↑ ^9.0 ^9.1 ^9.2 ^9.3 ^9.4 ^9.5 ^9.6 ^9.7 ^9.8 Hill RJ & Sternberg PW (1992) The gene lin-3 encodes an inductive signal for vulval development in C. elegans. Nature 358: 470-6 PubMed GONUTS page
↑ ^10.0 ^10.1 ^10.2 Horvitz HR & Sulston JE (1980) Isolation and genetic characterization of cell-lineage mutants of the nematode Caenorhabditis elegans. Genetics 96: 435-54 PubMed GONUTS page
↑ Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
↑ Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
↑ Rual JF et al. (2004) Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. Genome Res 14: 2162-8 PubMed GONUTS page
↑ ^14.0 ^14.1 Dutt A et al. (2004) EGF signal propagation during C. elegans vulval development mediated by ROM-1 rhomboid. PLoS Biol 2: e334 PubMed GONUTS page
↑ Chamberlin HM & Sternberg PW (1994) The lin-3/let-23 pathway mediates inductive signalling during male spicule development in Caenorhabditis elegans. Development 120: 2713-21 PubMed GONUTS page
↑ Clandinin TR et al. (1998) Inositol trisphosphate mediates a RAS-independent response to LET-23 receptor tyrosine kinase activation in C. elegans. Cell 92: 523-33 PubMed GONUTS page
↑ Kraemer BC et al. (2006) Molecular pathways that influence human tau-induced pathology in Caenorhabditis elegans. Hum Mol Genet 15: 1483-96 PubMed GONUTS page
↑ ^18.0 ^18.1 Thompson BE et al. (2006) Germ-line induction of the Caenorhabditis elegans vulva. Proc Natl Acad Sci U S A 103: 620-5 PubMed GONUTS page
↑ Maloof JN & Kenyon C (1998) The Hox gene lin-39 is required during C. elegans vulval induction to select the outcome of Ras signaling. Development 125: 181-90 PubMed GONUTS page

[PMID:14551910-0] 1.0 ^1.1 ^1.2 Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page

[PMID:15687288-1] Fernandez AG et al. (2005) New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones. Genome Res 15: 250-9 PubMed GONUTS page

[PMID:15791247-2] Sönnichsen B et al. (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-9 PubMed GONUTS page

[PMID:16507136-3] 4.0 ^4.1 ^4.2 ^4.3 ^4.4 Lehner B et al. (2006) Loss of LIN-35, the Caenorhabditis elegans ortholog of the tumor suppressor p105Rb, results in enhanced RNA interference. Genome Biol 7: R4 PubMed GONUTS page

[PMID:16845399-4] 5.0 ^5.1 ^5.2 Lehner B et al. (2006) Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways. Nat Genet 38: 896-903 PubMed GONUTS page

[PMID:17417969-5] 6.00 ^6.01 ^6.02 ^6.03 ^6.04 ^6.05 ^6.06 ^6.07 ^6.08 ^6.09 ^6.10 ^6.11 ^6.12 Ceron J et al. (2007) Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. BMC Dev Biol 7: 30 PubMed GONUTS page

[PMID:21529718-6] Green RA et al. (2011) A high-resolution C. elegans essential gene network based on phenotypic profiling of a complex tissue. Cell 145: 470-82 PubMed GONUTS page

[PMID:3996896-7] 8.0 ^8.1 Ferguson EL & Horvitz HR (1985) Identification and characterization of 22 genes that affect the vulval cell lineages of the nematode Caenorhabditis elegans. Genetics 110: 17-72 PubMed GONUTS page

[PMID:1641037-8] 9.0 ^9.1 ^9.2 ^9.3 ^9.4 ^9.5 ^9.6 ^9.7 ^9.8 Hill RJ & Sternberg PW (1992) The gene lin-3 encodes an inductive signal for vulval development in C. elegans. Nature 358: 470-6 PubMed GONUTS page

[PMID:7262539-9] 10.0 ^10.1 ^10.2 Horvitz HR & Sulston JE (1980) Isolation and genetic characterization of cell-lineage mutants of the nematode Caenorhabditis elegans. Genetics 96: 435-54 PubMed GONUTS page

[PMID:12520011-10] Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page

[PMID:12654719-11] Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page

[PMID:15489339-12] Rual JF et al. (2004) Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. Genome Res 14: 2162-8 PubMed GONUTS page

[PMID:15455032-13] 14.0 ^14.1 Dutt A et al. (2004) EGF signal propagation during C. elegans vulval development mediated by ROM-1 rhomboid. PLoS Biol 2: e334 PubMed GONUTS page

[PMID:7607066-14] Chamberlin HM & Sternberg PW (1994) The lin-3/let-23 pathway mediates inductive signalling during male spicule development in Caenorhabditis elegans. Development 120: 2713-21 PubMed GONUTS page

[PMID:9491893-15] Clandinin TR et al. (1998) Inositol trisphosphate mediates a RAS-independent response to LET-23 receptor tyrosine kinase activation in C. elegans. Cell 92: 523-33 PubMed GONUTS page

[PMID:16600994-16] Kraemer BC et al. (2006) Molecular pathways that influence human tau-induced pathology in Caenorhabditis elegans. Hum Mol Genet 15: 1483-96 PubMed GONUTS page

[PMID:16407099-17] 18.0 ^18.1 Thompson BE et al. (2006) Germ-line induction of the Caenorhabditis elegans vulva. Proc Natl Acad Sci U S A 103: 620-5 PubMed GONUTS page

[PMID:9486792-18] Maloof JN & Kenyon C (1998) The Hox gene lin-39 is required during C. elegans vulval induction to select the outcome of Ras signaling. Development 125: 181-90 PubMed GONUTS page

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Species (Taxon ID)	Caenorhabditis elegans (nematode) (taxon:6239)
Gene Name(s)	lin-3 ( synonyms: F36H1.4, sli-4 )
Protein Name(s)	No Information Provided.
External Links
WB	WBGene00002992

WB:lin-3

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