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WB:ina-1

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Contents

Species (Taxon ID) Caenorhabditis elegans (nematode) (taxon:6239)
Gene Name(s) ina-1 ( synonyms: F54G8.3 )
Protein Name(s) No Information Provided.
External Links
WB WBGene00002081

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000003

reproduction

WB_REF:WBPaper00006395
PMID:14551910[1]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00025641
WB:WBPhenotype:0001037

P

From WB

GO:0000003

reproduction

WB_REF:WBPaper00024497
PMID:15489339[2]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00032823
WB:WBPhenotype:0000689

P

From WB

GO:0001764

neuron migration

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00146319
WB:WBVar00146341
WB:WBVar00146356

P

From WB

GO:0002009

morphogenesis of an epithelium

WB_REF:WBPaper00005654
PMID:12529635[4]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00008861
WB:WBPhenotype:0000038

P

From WB

GO:0002119

nematode larval development

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00146330
WB:WBVar00146331

P

From WB

GO:0002119

nematode larval development

WB_REF:WBPaper00024497
PMID:15489339[2]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00032823
WB:WBPhenotype:0000054

P

From WB

GO:0005515

protein binding

WB_REF:WBPaper00002850
PMID:9247263[3]

IPI: Inferred from Physical Interaction

WB:WBGene00003930

F

From WB

GO:0005624

membrane fraction

WB_REF:WBPaper00002850
PMID:9247263[3]

IDA: Inferred from Direct Assay

C

From WB

GO:0005886

plasma membrane

WB_REF:WBPaper00036041
PMID:20226672[5]

IDA: Inferred from Direct Assay

C

From WB

GO:0006898

receptor-mediated endocytosis

WB_REF:WBPaper00030951
PMID:17704769[6]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00071344
WB:WBPhenotype:0001425

P

From WB

GO:0007155

cell adhesion

PMID:12520011[7]
PMID:12654719[8]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR000413

P

From WB

GO:0007413

axonal fasciculation

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00146341
WB:WBVar00146356

P

From WB

GO:0008078

mesodermal cell migration

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

P

From WB

GO:0008305

integrin complex

PMID:12520011[7]
PMID:12654719[8]

IEA: Inferred from Electronic Annotation

INTERPRO:IPR000413

C

From WB

GO:0008305

integrin complex

WB_REF:WBPaper00002850
PMID:9247263[3]

IPI: Inferred from Physical Interaction

WB:WBGene00003930

C

From WB

GO:0009887

organ morphogenesis

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

P

From WB

GO:0010171

body morphogenesis

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00146319
WB:WBVar00146330
WB:WBVar00146331
WB:WBVar00146341

P

From WB

GO:0016021

integral to membrane

PMID:12520011[7]
PMID:12654719[8]

IEA: Inferred from Electronic Annotation

CBS:TMHMM

C

From WB

GO:0033631

cell-cell adhesion mediated by integrin

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

WB:WBVar00146330

P

From WB

GO:0040011

locomotion

WB_REF:WBPaper00006395
PMID:14551910[1]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00025641
WB:WBPhenotype:0000643

P

From WB

GO:0040035

hermaphrodite genitalia development

WB_REF:WBPaper00006395
PMID:14551910[1]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00025641
WB:WBPhenotype:0000697

P

From WB

GO:0040035

hermaphrodite genitalia development

WB_REF:WBPaper00035117
PMID:19686680[9]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00083946
WB:WBPhenotype:0000697

P

From WB

GO:0040039

inductive cell migration

WB_REF:WBPaper00028783
PMID:17090602[10]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00065727
WB:WBPhenotype:0000195

P

From WB

GO:0040039

inductive cell migration

WB_REF:WBPaper00030828
PMID:17606640[11]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00075648
WB:WBPhenotype:0000195

P

From WB

GO:0040039

inductive cell migration

WB_REF:WBPaper00030828
PMID:17606640[11]

IMP: Inferred from Mutant Phenotype

WB:WBRNAi00075649
WB:WBPhenotype:0000195

P

From WB

GO:0043236

laminin binding

WB_REF:WBPaper00002850
PMID:9247263[3]

ISS: Inferred from Sequence or Structural Similarity

RGD:621633

F

From WB

GO:0045138

tail tip morphogenesis

WB_REF:WBPaper00002850
PMID:9247263[3]

IMP: Inferred from Mutant Phenotype

P

From WB


Notes

References

See Help:References for how to manage references in GONUTS.
  1. 1.0 1.1 1.2 Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page
  2. 2.0 2.1 Rual JF et al. (2004) Toward improving Caenorhabditis elegans phenome mapping with an ORFeome-based RNAi library. Genome Res 14: 2162-8 PubMed GONUTS page
  3. 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 3.11 Baum PD & Garriga G (1997) Neuronal migrations and axon fasciculation are disrupted in ina-1 integrin mutants. Neuron 19: 51-62 PubMed GONUTS page
  4. Kamath RS et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-7 PubMed GONUTS page
  5. Hsu TY & Wu YC (2010) Engulfment of apoptotic cells in C. elegans is mediated by integrin alpha/SRC signaling. Curr Biol 20: 477-86 PubMed GONUTS page
  6. Balklava Z et al. (2007) Genome-wide analysis identifies a general requirement for polarity proteins in endocytic traffic. Nat Cell Biol 9: 1066-73 PubMed GONUTS page
  7. 7.0 7.1 7.2 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
  8. 8.0 8.1 8.2 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
  9. Hagedorn EJ et al. (2009) Integrin acts upstream of netrin signaling to regulate formation of the anchor cell's invasive membrane in C. elegans. Dev Cell 17: 187-98 PubMed GONUTS page
  10. Cram EJ et al. (2006) A systematic RNA interference screen reveals a cell migration gene network in C. elegans. J Cell Sci 119: 4811-8 PubMed GONUTS page
  11. 11.0 11.1 Meighan CM & Schwarzbauer JE (2007) Control of C. elegans hermaphrodite gonad size and shape by vab-3/Pax6-mediated regulation of integrin receptors. Genes Dev 21: 1615-20 PubMed GONUTS page
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