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WB:hmr-1
Contents |
| Species (Taxon ID) | Caenorhabditis elegans (nematode) (taxon:6239) | |
| Gene Name(s) | hmr-1 ( synonyms: W02B9.1 ) | |
| Protein Name(s) | No Information Provided. | |
| External Links | ||
| WB | WBGene00001980 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000003 |
reproduction |
WB_REF:WBPaper00006395 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00026456 |
P |
From WB |
||
| GO:0000132 |
establishment of mitotic spindle orientation |
WB_REF:WBPaper00036330 |
IGI: Inferred from Genetic Interaction |
WB:WBGene00004732 |
P |
From WB |
||
| GO:0000132 |
establishment of mitotic spindle orientation |
WB_REF:WBPaper00036330 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
|||
| GO:0002119 |
nematode larval development |
WB_REF:WBPaper00029258 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00075305 |
P |
From WB |
||
| GO:0003384 |
apical constriction involved in gastrulation |
WB_REF:WBPaper00036330 |
IGI: Inferred from Genetic Interaction |
WB:WBGene00004732 |
P |
From WB |
||
| GO:0005509 |
calcium ion binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002126 |
F |
From WB |
|||
| GO:0005886 |
plasma membrane |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR020894 |
C |
From WB |
|||
| GO:0005913 |
cell-cell adherens junction |
WB_REF:WBPaper00003046 |
IDA: Inferred from Direct Assay |
C |
From WB |
|||
| GO:0006898 |
receptor-mediated endocytosis |
WB_REF:WBPaper00030951 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00071059 |
P |
From WB |
||
| GO:0007016 |
cytoskeletal anchoring at plasma membrane |
WB_REF:WBPaper00003046 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
|||
| GO:0007155 |
cell adhesion |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR020894 |
P |
From WB |
|||
| GO:0007156 |
homophilic cell adhesion |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002126 |
P |
From WB |
|||
| GO:0007413 |
axonal fasciculation |
WB_REF:WBPaper00005031 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00078672 |
P |
From WB |
||
| GO:0008013 |
beta-catenin binding |
WB_REF:WBPaper00004237 |
IPI: Inferred from Physical Interaction |
WB:WBGene00001979 |
F |
From WB |
||
| GO:0008013 |
beta-catenin binding |
WB_REF:WBPaper00005972 |
IPI: Inferred from Physical Interaction |
WB:WBGene00001979 |
F |
From WB |
||
| GO:0009790 |
embryo development |
WB_REF:WBPaper00003046 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
|||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00004402 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00004369 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00004651 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00001716 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00006395 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00026456 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00006395 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00026457 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00025054 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00054576 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00026769 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00061082 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00026769 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00061083 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00026769 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00061084 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00026769 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00061085 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00026769 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00061086 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00029082 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00077362 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00029258 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00075305 |
P |
From WB |
||
| GO:0010171 |
body morphogenesis |
WB_REF:WBPaper00004402 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00004369 |
P |
From WB |
||
| GO:0010171 |
body morphogenesis |
WB_REF:WBPaper00004402 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00004369 |
P |
From WB |
||
| GO:0010171 |
body morphogenesis |
WB_REF:WBPaper00029258 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00075305 |
P |
From WB |
||
| GO:0016020 |
membrane |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR002126 |
C |
From WB |
|||
| GO:0016021 |
integral to membrane |
IEA: Inferred from Electronic Annotation |
CBS:TMHMM |
C |
From WB |
|||
| GO:0016342 |
catenin complex |
WB_REF:WBPaper00004237 |
IPI: Inferred from Physical Interaction |
WB:WBGene00001979 |
C |
From WB |
||
| GO:0016477 |
cell migration |
WB_REF:WBPaper00003046 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
|||
| GO:0040011 |
locomotion |
WB_REF:WBPaper00004402 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00004369 |
P |
From WB |
||
| GO:0042074 |
cell migration involved in gastrulation |
WB_REF:WBPaper00036330 |
IGI: Inferred from Genetic Interaction |
WB:WBGene00004732 |
P |
From WB |
||
| GO:0043053 |
dauer entry |
WB_REF:WBPaper00006382 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00063122 |
P |
From WB |
||
| GO:0070097 |
delta-catenin binding |
WB_REF:WBPaper00005972 |
IPI: Inferred from Physical Interaction |
WB:WBGene00002175 |
F |
From WB |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Grana TM et al. (2010) SAX-7/L1CAM and HMR-1/cadherin function redundantly in blastomere compaction and non-muscle myosin accumulation during Caenorhabditis elegans gastrulation. Dev Biol 344: 731-44 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Ceron J et al. (2007) Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. BMC Dev Biol 7: 30 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 Costa M et al. (1998) A putative catenin-cadherin system mediates morphogenesis of the Caenorhabditis elegans embryo. J Cell Biol 141: 297-308 PubMed GONUTS page
- ↑ Balklava Z et al. (2007) Genome-wide analysis identifies a general requirement for polarity proteins in endocytic traffic. Nat Cell Biol 9: 1066-73 PubMed GONUTS page
- ↑ Broadbent ID & Pettitt J (2002) The C. elegans hmr-1 gene can encode a neuronal classic cadherin involved in the regulation of axon fasciculation. Curr Biol 12: 59-63 PubMed GONUTS page
- ↑ 9.0 9.1 Korswagen HC et al. (2000) Distinct beta-catenins mediate adhesion and signalling functions in C. elegans. Nature 406: 527-32 PubMed GONUTS page
- ↑ 10.0 10.1 Pettitt J et al. (2003) The Caenorhabditis elegans p120 catenin homologue, JAC-1, modulates cadherin-catenin function during epidermal morphogenesis. J Cell Biol 162: 15-22 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 11.3 Fraser AG et al. (2000) Functional genomic analysis of C. elegans chromosome I by systematic RNA interference. Nature 408: 325-30 PubMed GONUTS page
- ↑ Maeda I et al. (2001) Large-scale analysis of gene function in Caenorhabditis elegans by high-throughput RNAi. Curr Biol 11: 171-6 PubMed GONUTS page
- ↑ Sönnichsen B et al. (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-9 PubMed GONUTS page
- ↑ 14.0 14.1 14.2 14.3 14.4 Wang D & Ruvkun G (2004) Regulation of Caenorhabditis elegans RNA interference by the daf-2 insulin stress and longevity signaling pathway. Cold Spring Harb Symp Quant Biol 69: 429-31 PubMed GONUTS page
- ↑ Mizumoto K & Sawa H (2007) Cortical beta-catenin and APC regulate asymmetric nuclear beta-catenin localization during asymmetric cell division in C. elegans. Dev Cell 12: 287-99 PubMed GONUTS page
- ↑ Kennedy S et al. (2004) A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans. Nature 427: 645-9 PubMed GONUTS page
