GONUTS is under stress! The website is currently experiencing long-wait times and frequent time-outs due to the record number of students, groups, and annotations related to CACAO this semester. We are currently working on increasing performance -- please accept our apologies for the technical difficulties.
You can help reduce stress on the server by:
- not reloading pages frequently - this just adds
- opening links in new windows (so you can read the old page)
WB:ama-1
Contents |
| Species (Taxon ID) | Caenorhabditis elegans (nematode) (taxon:6239) | |
| Gene Name(s) | ama-1 ( synonyms: F36A4.7, rpb-1 ) | |
| Protein Name(s) | No Information Provided. | |
| External Links | ||
| WB | WBGene00000123 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000003 |
reproduction |
WB_REF:WBPaper00004651 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00002210 |
P |
From WB |
||
| GO:0000003 |
reproduction |
WB_REF:WBPaper00036244 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00083858 |
P |
From WB |
||
| GO:0000003 |
reproduction |
WB_REF:WBPaper00036244 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00083870 |
P |
From WB |
||
| GO:0000003 |
reproduction |
WB_REF:WBPaper00036244 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00083882 |
P |
From WB |
||
| GO:0001055 |
RNA polymerase II activity |
WB_REF:WBPaper00000654 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00088580 |
F |
From WB |
||
| GO:0001055 |
RNA polymerase II activity |
WB_REF:WBPaper00001354 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00088580 |
F |
From WB |
||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR000684 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR000722 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR006592 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007066 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007073 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007075 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007080 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007081 |
F |
From WB |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007083 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR000722 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR006592 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007066 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007073 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007075 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007080 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007081 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007083 |
F |
From WB |
|||
| GO:0003899 |
DNA-directed RNA polymerase activity |
WB_REF:WBPaper00001191 |
ISS: Inferred from Sequence or Structural Similarity |
F |
From WB |
|||
| GO:0005634 |
nucleus |
WB_REF:WBPaper00002044 |
IDA: Inferred from Direct Assay |
C |
From WB |
|||
| GO:0005634 |
nucleus |
WB_REF:WBPaper00006475 |
IDA: Inferred from Direct Assay |
C |
From WB |
|||
| GO:0005665 |
DNA-directed RNA polymerase II, core complex |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR000684 |
C |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR000722 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR006592 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007066 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007073 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007075 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007080 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007081 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR007083 |
P |
From WB |
|||
| GO:0006351 |
transcription, DNA-dependent |
WB_REF:WBPaper00002567 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
|||
| GO:0006366 |
transcription from RNA polymerase II promoter |
IEA: Inferred from Electronic Annotation |
INTERPRO:IPR000684 |
P |
From WB |
|||
| GO:0006479 |
protein methylation |
WB_REF:WBPaper00028483 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00086513 |
P |
From WB |
||
| GO:0006479 |
protein methylation |
WB_REF:WBPaper00028483 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00086514 |
P |
From WB |
||
| GO:0007052 |
mitotic spindle organization |
WB_REF:WBPaper00024624 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00062632 |
P |
From WB |
||
| GO:0007369 |
gastrulation |
WB_REF:WBPaper00002567 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
|||
| GO:0008356 |
asymmetric cell division |
WB_REF:WBPaper00003382 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00065358 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00004476 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00075670 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00004651 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00002210 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00005224 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00024332 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00005654 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00008752 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00006395 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00025404 |
P |
From WB |
||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00006475 |
IMP: Inferred from Mutant Phenotype |
P |
From WB |
|||
| GO:0009792 |
embryo development ending in birth or egg hatching |
WB_REF:WBPaper00025054 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00046459 |
P |
From WB |
||
| GO:0010458 |
exit from mitosis |
WB_REF:WBPaper00003382 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00065358 |
P |
From WB |
||
| GO:0032502 |
developmental process |
WB_REF:WBPaper00036244 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00083858 |
P |
From WB |
||
| GO:0032502 |
developmental process |
WB_REF:WBPaper00036244 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00083870 |
P |
From WB |
||
| GO:0032502 |
developmental process |
WB_REF:WBPaper00036244 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00083882 |
P |
From WB |
||
| GO:0040010 |
positive regulation of growth rate |
WB_REF:WBPaper00005654 |
IMP: Inferred from Mutant Phenotype |
WB:WBRNAi00008752 |
P |
From WB |
||
| GO:0042789 |
mRNA transcription from RNA polymerase II promoter |
WB_REF:WBPaper00000654 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00088580 |
P |
From WB |
||
| GO:0042789 |
mRNA transcription from RNA polymerase II promoter |
WB_REF:WBPaper00001354 |
IMP: Inferred from Mutant Phenotype |
WB:WBVar00088580 |
P |
From WB |
| |
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Maeda I et al. (2001) Large-scale analysis of gene function in Caenorhabditis elegans by high-throughput RNAi. Curr Biol 11: 171-6 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Kerins JA et al. (2010) PRP-17 and the pre-mRNA splicing pathway are preferentially required for the proliferation versus meiotic development decision and germline sex determination in Caenorhabditis elegans. Dev Dyn 239: 1555-72 PubMed GONUTS page
- ↑ 3.0 3.1 Sanford T et al. (1983) RNA polymerase II from wild type and alpha-amanitin-resistant strains of Caenorhabditis elegans. J Biol Chem 258: 12804-9 PubMed GONUTS page
- ↑ 4.0 4.1 Rogalski TM et al. (1990) Mutant Caenorhabditis elegans RNA polymerase II with a 20,000-fold reduced sensitivity to alpha-amanitin. Genetics 126: 889-98 PubMed GONUTS page
- ↑ 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 5.10 5.11 5.12 5.13 5.14 5.15 5.16 5.17 5.18 5.19 5.20 5.21 5.22 5.23 5.24 5.25 5.26 Mulder NJ et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 31: 315-8 PubMed GONUTS page
- ↑ 6.00 6.01 6.02 6.03 6.04 6.05 6.06 6.07 6.08 6.09 6.10 6.11 6.12 6.13 6.14 6.15 6.16 6.17 6.18 6.19 6.20 6.21 6.22 6.23 6.24 6.25 6.26 Camon E et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Res 13: 662-72 PubMed GONUTS page
- ↑ Bird DM & Riddle DL (1989) Molecular cloning and sequencing of ama-1, the gene encoding the largest subunit of Caenorhabditis elegans RNA polymerase II. Mol Cell Biol 9: 4119-30 PubMed GONUTS page
- ↑ Seydoux G & Fire A (1994) Soma-germline asymmetry in the distributions of embryonic RNAs in Caenorhabditis elegans. Development 120: 2823-34 PubMed GONUTS page
- ↑ 9.0 9.1 Walker AK et al. (2004) An extensive requirement for transcription factor IID-specific TAF-1 in Caenorhabditis elegans embryonic transcription. J Biol Chem 279: 15339-47 PubMed GONUTS page
- ↑ 10.0 10.1 Powell-Coffman JA et al. (1996) Onset of C. elegans gastrulation is blocked by inhibition of embryonic transcription with an RNA polymerase antisense RNA. Dev Biol 178: 472-83 PubMed GONUTS page
- ↑ 11.0 11.1 Bender LB et al. (2006) MES-4: an autosome-associated histone methyltransferase that participates in silencing the X chromosomes in the C. elegans germ line. Development 133: 3907-17 PubMed GONUTS page
- ↑ Walston T et al. (2004) Multiple Wnt signaling pathways converge to orient the mitotic spindle in early C. elegans embryos. Dev Cell 7: 831-41 PubMed GONUTS page
- ↑ 13.0 13.1 Tabara H et al. (1999) pos-1 encodes a cytoplasmic zinc-finger protein essential for germline specification in C. elegans. Development 126: 1-11 PubMed GONUTS page
- ↑ Kuroyanagi H et al. (2000) SPK-1, a C. elegans SR protein kinase homologue, is essential for embryogenesis and required for germline development. Mech Dev 99: 51-64 PubMed GONUTS page
- ↑ Wallenfang MR & Seydoux G (2002) cdk-7 Is required for mRNA transcription and cell cycle progression in Caenorhabditis elegans embryos. Proc Natl Acad Sci U S A 99: 5527-32 PubMed GONUTS page
- ↑ 16.0 16.1 Kamath RS et al. (2003) Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 421: 231-7 PubMed GONUTS page
- ↑ Simmer F et al. (2003) Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. PLoS Biol 1: E12 PubMed GONUTS page
- ↑ Sönnichsen B et al. (2005) Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans. Nature 434: 462-9 PubMed GONUTS page
